Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dirofilaria_20immitis_20[genbank_20GCA_5F001077395.1_202013-08-23] 25,560 sequences; 84,888,114 total letters Query= NC_009011.2 Length=131331 Score E Sequences producing significant alignments: (Bits) Value seq3028 98.7 8e-16 >seq3028 Length=62347 Score = 98.7 bits (108), Expect = 8e-16 Identities = 164/233 (70%), Gaps = 3/233 (1%) Strand=Plus/Plus Query 114152 AATA-CCGCCACGTAGTCTCAAAACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAAT 114210 |||| || ||||| || | | ||| || || | ||| ||||| || ||||| || |||| Sbjct 28085 AATAGCCACCACGAAGACGAAGAACCAAGTGAAGCGTCGATTCCTTCTGAATATTATAAT 28144 Query 114211 CGCTCATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCG 114270 | | |||||| ||| || ||||| || || || |||| || ||||||||||| | Sbjct 28145 CCGATAACGTACGACCATCCTCCAGTTGCTTCCCGGCAAAGATCAGTCGCTGTTGGTCTG 28204 Query 114271 GAGGAATGCCTTCTTTGTCGGCAATCTTTTGTTTTAGC-TGTTCAACGGTGTCGGTGGAT 114329 | ||||| || || ||||| || ||||| |||| | | || | || || | | | Sbjct 28205 GTGGAATACCCTCCTTGTCTTGGAT-TTTTGCTTTAACATTCTCGATCGTATCCGATGCT 28263 Query 114330 TCGACGTCCACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 114382 || || |||| || | ||||| || |||| |||||| || ||||| ||||| Sbjct 28264 TCCACTTCCAACGTTATGGTTTTACCCGTCAAAGTTTTCACGAAAATTTGCAT 28316 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 420003522882720