Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Dirofilaria_20immitis_20[genbank_20GCA_5F001077395.1_202013-08-23]
25,560 sequences; 84,888,114 total letters
Query= NC_009514.1
Length=47021
Score E
Sequences producing significant alignments: (Bits) Value
seq24227 421 2e-113
seq24591 349 1e-91
>seq24227
Length=246
Score = 421 bits (466), Expect = 2e-113
Identities = 241/246 (98%), Gaps = 0/246 (0%)
Strand=Plus/Minus
Query 16064 CTGCGACCAGTCAGTGCCGGACGGCTTTGGCGGCACGGAGCCGCGCATCACCTGTAATGC 16123
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 246 CTGCGACCAGTCAGTGCCGGACGGCTTTGGCGGCACGGAGCCGCGCATCACCTGTAATGC 187
Query 16124 GTACCTGACCACACAGCGCAAGGCGTGGGATGTGCTCAGTGATTTCTGCTCGGCGATGCG 16183
|||||||||||||||||| |||||||||||||||||||| ||||||||||||||||||||
Sbjct 186 GTACCTGACCACACAGCGTAAGGCGTGGGATGTGCTCAGCGATTTCTGCTCGGCGATGCG 127
Query 16184 CTGTATGCCGGTATGGAACGGGCAAACGCTGACGTTCGTGCAGGACCGACCGTCGGATAA 16243
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct 126 CTGTATGCCGGTATGGAACGGGCAGACGCTGACGTTCGTGCAGGACCGACCGTCGGATAA 67
Query 16244 GGTGTGGACCTATAACCGCAGTAATGTGGTGATGCCGGATGATGGCGCGCCGTTCCGCTA 16303
| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 66 GACGTGGACCTATAACCGCAGTAATGTGGTGATGCCGGATGATGGCGCGCCGTTCCGCTA 7
Query 16304 CAGCTT 16309
||||||
Sbjct 6 CAGCTT 1
>seq24591
Length=232
Score = 349 bits (386), Expect = 1e-91
Identities = 216/231 (94%), Gaps = 0/231 (0%)
Strand=Plus/Minus
Query 16924 AAAAAGAAGCCATCGTGGATAACGGGGCGCACTTTGACGGCGACCAGAGCGGCACGGTGA 16983
||||||| ||||||||||||||||||||||||||||||||||| ||||| ||||||||||
Sbjct 231 AAAAAGAGGCCATCGTGGATAACGGGGCGCACTTTGACGGCGAACAGAGTGGCACGGTGA 172
Query 16984 ATGGTGTCACGCCGCCAGCGGTGCAGCACCTGACCGCCGAAGTCACCGCAGACAGTGGGG 17043
||||||||||||||||||||||||||||||||||||| |||||||| |||||||| ||||
Sbjct 171 ATGGTGTCACGCCGCCAGCGGTGCAGCACCTGACCGCAGAAGTCACTGCAGACAGCGGGG 112
Query 17044 AATATCAGGTGCTGGCCCGCTGGGACACGCCGAAGGTGGTGAAGGGCGTGAGCTTCCTGC 17103
|||||||||||||||| || |||||||| ||||||||||||||||||||||| |||||||
Sbjct 111 AATATCAGGTGCTGGCGCGATGGGACACACCGAAGGTGGTGAAGGGCGTGAGTTTCCTGC 52
Query 17104 TTCGCCTGACCGTGGCAGCGGATGACGGCAGTGAGCGGCTGGTCAGCACGG 17154
| || |||||||| ||||||| ||||||||||||||||||||||||||||
Sbjct 51 TCCGTCTGACCGTAACAGCGGACGACGGCAGTGAGCGGCTGGTCAGCACGG 1
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 150299966351760
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |