Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dirofilaria_20immitis_20[genbank_20GCA_5F001077395.1_202013-08-23] 25,560 sequences; 84,888,114 total letters Query= NC_009514.1 Length=47021 Score E Sequences producing significant alignments: (Bits) Value seq24227 421 2e-113 seq24591 349 1e-91 >seq24227 Length=246 Score = 421 bits (466), Expect = 2e-113 Identities = 241/246 (98%), Gaps = 0/246 (0%) Strand=Plus/Minus Query 16064 CTGCGACCAGTCAGTGCCGGACGGCTTTGGCGGCACGGAGCCGCGCATCACCTGTAATGC 16123 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 246 CTGCGACCAGTCAGTGCCGGACGGCTTTGGCGGCACGGAGCCGCGCATCACCTGTAATGC 187 Query 16124 GTACCTGACCACACAGCGCAAGGCGTGGGATGTGCTCAGTGATTTCTGCTCGGCGATGCG 16183 |||||||||||||||||| |||||||||||||||||||| |||||||||||||||||||| Sbjct 186 GTACCTGACCACACAGCGTAAGGCGTGGGATGTGCTCAGCGATTTCTGCTCGGCGATGCG 127 Query 16184 CTGTATGCCGGTATGGAACGGGCAAACGCTGACGTTCGTGCAGGACCGACCGTCGGATAA 16243 |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct 126 CTGTATGCCGGTATGGAACGGGCAGACGCTGACGTTCGTGCAGGACCGACCGTCGGATAA 67 Query 16244 GGTGTGGACCTATAACCGCAGTAATGTGGTGATGCCGGATGATGGCGCGCCGTTCCGCTA 16303 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 66 GACGTGGACCTATAACCGCAGTAATGTGGTGATGCCGGATGATGGCGCGCCGTTCCGCTA 7 Query 16304 CAGCTT 16309 |||||| Sbjct 6 CAGCTT 1 >seq24591 Length=232 Score = 349 bits (386), Expect = 1e-91 Identities = 216/231 (94%), Gaps = 0/231 (0%) Strand=Plus/Minus Query 16924 AAAAAGAAGCCATCGTGGATAACGGGGCGCACTTTGACGGCGACCAGAGCGGCACGGTGA 16983 ||||||| ||||||||||||||||||||||||||||||||||| ||||| |||||||||| Sbjct 231 AAAAAGAGGCCATCGTGGATAACGGGGCGCACTTTGACGGCGAACAGAGTGGCACGGTGA 172 Query 16984 ATGGTGTCACGCCGCCAGCGGTGCAGCACCTGACCGCCGAAGTCACCGCAGACAGTGGGG 17043 ||||||||||||||||||||||||||||||||||||| |||||||| |||||||| |||| Sbjct 171 ATGGTGTCACGCCGCCAGCGGTGCAGCACCTGACCGCAGAAGTCACTGCAGACAGCGGGG 112 Query 17044 AATATCAGGTGCTGGCCCGCTGGGACACGCCGAAGGTGGTGAAGGGCGTGAGCTTCCTGC 17103 |||||||||||||||| || |||||||| ||||||||||||||||||||||| ||||||| Sbjct 111 AATATCAGGTGCTGGCGCGATGGGACACACCGAAGGTGGTGAAGGGCGTGAGTTTCCTGC 52 Query 17104 TTCGCCTGACCGTGGCAGCGGATGACGGCAGTGAGCGGCTGGTCAGCACGG 17154 | || |||||||| ||||||| |||||||||||||||||||||||||||| Sbjct 51 TCCGTCTGACCGTAACAGCGGACGACGGCAGTGAGCGGCTGGTCAGCACGG 1 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 150299966351760