Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dirofilaria_20immitis_20[genbank_20GCA_5F001077395.1_202013-08-23] 25,560 sequences; 84,888,114 total letters Query= NC_010240.1 Length=169794 Score E Sequences producing significant alignments: (Bits) Value seq4479 89.7 6e-13 seq1083 87.8 2e-12 >seq4479 Length=2672 Score = 89.7 bits (98), Expect = 6e-13 Identities = 75/90 (83%), Gaps = 3/90 (3%) Strand=Plus/Plus Query 56996 TGAAAAATTTT--CTCCTCGGCAAGAAATCGAACCCTGGTCTCCCGCGTGACAGGCGGAC 57053 || |||| ||| |||| |||| | |||||||||| |||||| | ||||||||||| Sbjct 2342 TGTAAAAGTTTGCCTCCCCGGCCGGGAATCGAACCCGGGTCTCGCACGTGACAGGCGCGG 2401 Query 57054 ATACTCACCACTATACTACCGAGGA-TTGA 57082 ||||||||||||||||||||||||| |||| Sbjct 2402 ATACTCACCACTATACTACCGAGGACTTGA 2431 Score = 86.0 bits (94), Expect = 7e-12 Identities = 70/84 (83%), Gaps = 2/84 (2%) Strand=Plus/Minus Query 56997 GAAAA--ATTTTCTCCTCGGCAAGAAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACA 57054 ||||| ||| |||| |||| | |||||||||| |||||| | ||||||||||| | Sbjct 1305 GAAAAGCATTGCCTCCCCGGCCGGGAATCGAACCCGGGTCTCGCACGTGACAGGCGCGGA 1246 Query 57055 TACTCACCACTATACTACCGAGGA 57078 |||||||||||||||||||||||| Sbjct 1245 TACTCACCACTATACTACCGAGGA 1222 >seq1083 Length=22644 Score = 87.8 bits (96), Expect = 2e-12 Identities = 65/76 (86%), Gaps = 0/76 (0%) Strand=Plus/Minus Query 57007 CTCCTCGGCAAGAAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACTA 57066 |||| |||| | |||||||||| |||||| | ||||||||||| ||||||||||||| Sbjct 2258 CTCCCCGGCCGGGAATCGAACCCGGGTCTCGCACGTGACAGGCGCGGATACTCACCACTA 2199 Query 57067 TACTACCGAGGATTGA 57082 |||||||||||| ||| Sbjct 2198 TACTACCGAGGACTGA 2183 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 543039243510400