Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dirofilaria_20immitis_20[genbank_20GCA_5F001077395.1_202013-08-23] 25,560 sequences; 84,888,114 total letters Query= NC_011345.1 Length=155122 Score E Sequences producing significant alignments: (Bits) Value seq3028 98.7 1e-15 >seq3028 Length=62347 Score = 98.7 bits (108), Expect = 1e-15 Identities = 159/229 (69%), Gaps = 0/229 (0%) Strand=Plus/Plus Query 138386 AGCCGCCTCGCAAACGCAAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGC 138445 |||| || || | ||| | ||| || || | | || ||||| ||||| || || || Sbjct 28088 AGCCACCACGAAGACGAAGAACCAAGTGAAGCGTCGATTCCTTCTGAATATTATAATCCG 28147 Query 138446 TCATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAG 138505 | ||||| ||||| ||||| || |||| | |||| || ||||||||||| || | Sbjct 28148 ATAACGTACGACCATCCTCCAGTTGCTTCCCGGCAAAGATCAGTCGCTGTTGGTCTGGTG 28207 Query 138506 GTATACCTTCTTTGTCGGTGATTTTTTGTTTTAATTGTTCCACGGTGTCGGTCGACTCCA 138565 | ||||| || ||||| ||||||| ||| | | || | || || | | |||| Sbjct 28208 GAATACCCTCCTTGTCTTGGATTTTTGCTTTAACATTCTCGATCGTATCCGATGCTTCCA 28267 Query 138566 CCTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTACAAAAATCTGCAT 138614 | || | ||| | |||||||| |||| |||||| || ||||| ||||| Sbjct 28268 CTTCCAACGTTATGGTTTTACCCGTCAAAGTTTTCACGAAAATTTGCAT 28316 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 496103844163200