Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Dirofilaria_20immitis_20[genbank_20GCA_5F001077395.1_202013-08-23]
25,560 sequences; 84,888,114 total letters
Query= NC_011357.1
Length=62147
Score E
Sequences producing significant alignments: (Bits) Value
seq22751 250 1e-61
seq24227 241 5e-59
seq24591 150 7e-32
>seq22751
Length=317
Score = 250 bits (276), Expect = 1e-61
Identities = 144/148 (97%), Gaps = 0/148 (0%)
Strand=Plus/Plus
Query 6232 GGGAGGTAAACGGGCATTTCAGCTCAAGGCCATTGCCGTCACTGCATAAACCATCGGGAG 6291
|||||||||||||| ||||||| |||||||| ||||||||||||||||||||||||||||
Sbjct 141 GGGAGGTAAACGGGTATTTCAGTTCAAGGCCGTTGCCGTCACTGCATAAACCATCGGGAG 200
Query 6292 AGCAGGCGGTACGCATACTTTCGTCGCGATAGATGATCGGGGATTCAGTAACATTCACGC 6351
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 201 AGCAGGCGGTACGCATACTTTCGTCGCGATAGATGATCGGGGATTCAGTAACATTCACGC 260
Query 6352 CGGAAGTGAACTCAAACAGGGTTCTGGC 6379
|||||||||| |||||||||||||||||
Sbjct 261 CGGAAGTGAATTCAAACAGGGTTCTGGC 288
>seq24227
Length=246
Score = 241 bits (266), Expect = 5e-59
Identities = 201/246 (82%), Gaps = 0/246 (0%)
Strand=Plus/Minus
Query 52700 CTGCGACCAGATGGTCCCTGATGGTTTCGGGGGCACAGAGCCGCGGATGACCTTTAATGC 52759
|||||||||| || || || || || || ||||| |||||||| || |||| ||||||
Sbjct 246 CTGCGACCAGTCAGTGCCGGACGGCTTTGGCGGCACGGAGCCGCGCATCACCTGTAATGC 187
Query 52760 GTACCTGTCACAACAGCGTAAGGCGTGGGACGTTCTCAGTGATTTCTGCTCGGCGATGCG 52819
||||||| | |||||||||||||||||| || ||||| ||||||||||||||||||||
Sbjct 186 GTACCTGACCACACAGCGTAAGGCGTGGGATGTGCTCAGCGATTTCTGCTCGGCGATGCG 127
Query 52820 CTGTATGCCGGTATGGAACGGCCAGACGCTGACGTTCGTTCAGGACAGCCCGTCGGATGT 52879
||||||||||||||||||||| ||||||||||||||||| |||||| | |||||||||
Sbjct 126 CTGTATGCCGGTATGGAACGGGCAGACGCTGACGTTCGTGCAGGACCGACCGTCGGATAA 67
Query 52880 GGTGTGGCCGTACACCAACAGTGATGTGGTGGTGGATGATAACGGCGTGGGGTTTCGCTA 52939
| |||| | || | | |||| |||||||| || ||| | |||| | ||| |||||
Sbjct 66 GACGTGGACCTATAACCGCAGTAATGTGGTGATGCCGGATGATGGCGCGCCGTTCCGCTA 7
Query 52940 CAGCTT 52945
||||||
Sbjct 6 CAGCTT 1
>seq24591
Length=232
Score = 150 bits (166), Expect = 7e-32
Identities = 151/195 (77%), Gaps = 6/195 (3%)
Strand=Plus/Minus
Query 53559 GAAAAAGAAGCCATCGTGGATAACGGGGCGCACTTTGACGGCGACCAGAGCGGCACCCTG 53618
|||||||| ||||||||||||||||||||||||||||||||||| ||||| ||||| ||
Sbjct 232 GAAAAAGAGGCCATCGTGGATAACGGGGCGCACTTTGACGGCGAACAGAGTGGCACGGTG 173
Query 53619 AACAGCGTCATCCCTCCGGCAGTGCAGCACCTGACGGTGGAGGTGAGTGCAGCTGACAGC 53678
|| | |||| || || || |||||||||||||| | || || | ||||| |||||
Sbjct 172 AATGGTGTCACGCCGCCAGCGGTGCAGCACCTGACCGCAGAAGTCACTGCAG---ACAGC 116
Query 53679 CAG---TATCTGGCACAGGCGAAATGGGACACGCCGCGGGTGGTGAAGGGGGTGCGCTTC 53735
| |||| || | |||| ||||||||| ||| |||||||||||| ||| | |||
Sbjct 115 GGGGAATATCAGGTGCTGGCGCGATGGGACACACCGAAGGTGGTGAAGGGCGTGAGTTTC 56
Query 53736 AGTCTGCGACTGACC 53750
|| || ||||||
Sbjct 55 CTGCTCCGTCTGACC 41
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 198688474770480
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |