Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dirofilaria_20immitis_20[genbank_20GCA_5F001077395.1_202013-08-23] 25,560 sequences; 84,888,114 total letters Query= NC_011357.1 Length=62147 Score E Sequences producing significant alignments: (Bits) Value seq22751 250 1e-61 seq24227 241 5e-59 seq24591 150 7e-32 >seq22751 Length=317 Score = 250 bits (276), Expect = 1e-61 Identities = 144/148 (97%), Gaps = 0/148 (0%) Strand=Plus/Plus Query 6232 GGGAGGTAAACGGGCATTTCAGCTCAAGGCCATTGCCGTCACTGCATAAACCATCGGGAG 6291 |||||||||||||| ||||||| |||||||| |||||||||||||||||||||||||||| Sbjct 141 GGGAGGTAAACGGGTATTTCAGTTCAAGGCCGTTGCCGTCACTGCATAAACCATCGGGAG 200 Query 6292 AGCAGGCGGTACGCATACTTTCGTCGCGATAGATGATCGGGGATTCAGTAACATTCACGC 6351 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 201 AGCAGGCGGTACGCATACTTTCGTCGCGATAGATGATCGGGGATTCAGTAACATTCACGC 260 Query 6352 CGGAAGTGAACTCAAACAGGGTTCTGGC 6379 |||||||||| ||||||||||||||||| Sbjct 261 CGGAAGTGAATTCAAACAGGGTTCTGGC 288 >seq24227 Length=246 Score = 241 bits (266), Expect = 5e-59 Identities = 201/246 (82%), Gaps = 0/246 (0%) Strand=Plus/Minus Query 52700 CTGCGACCAGATGGTCCCTGATGGTTTCGGGGGCACAGAGCCGCGGATGACCTTTAATGC 52759 |||||||||| || || || || || || ||||| |||||||| || |||| |||||| Sbjct 246 CTGCGACCAGTCAGTGCCGGACGGCTTTGGCGGCACGGAGCCGCGCATCACCTGTAATGC 187 Query 52760 GTACCTGTCACAACAGCGTAAGGCGTGGGACGTTCTCAGTGATTTCTGCTCGGCGATGCG 52819 ||||||| | |||||||||||||||||| || ||||| |||||||||||||||||||| Sbjct 186 GTACCTGACCACACAGCGTAAGGCGTGGGATGTGCTCAGCGATTTCTGCTCGGCGATGCG 127 Query 52820 CTGTATGCCGGTATGGAACGGCCAGACGCTGACGTTCGTTCAGGACAGCCCGTCGGATGT 52879 ||||||||||||||||||||| ||||||||||||||||| |||||| | ||||||||| Sbjct 126 CTGTATGCCGGTATGGAACGGGCAGACGCTGACGTTCGTGCAGGACCGACCGTCGGATAA 67 Query 52880 GGTGTGGCCGTACACCAACAGTGATGTGGTGGTGGATGATAACGGCGTGGGGTTTCGCTA 52939 | |||| | || | | |||| |||||||| || ||| | |||| | ||| ||||| Sbjct 66 GACGTGGACCTATAACCGCAGTAATGTGGTGATGCCGGATGATGGCGCGCCGTTCCGCTA 7 Query 52940 CAGCTT 52945 |||||| Sbjct 6 CAGCTT 1 >seq24591 Length=232 Score = 150 bits (166), Expect = 7e-32 Identities = 151/195 (77%), Gaps = 6/195 (3%) Strand=Plus/Minus Query 53559 GAAAAAGAAGCCATCGTGGATAACGGGGCGCACTTTGACGGCGACCAGAGCGGCACCCTG 53618 |||||||| ||||||||||||||||||||||||||||||||||| ||||| ||||| || Sbjct 232 GAAAAAGAGGCCATCGTGGATAACGGGGCGCACTTTGACGGCGAACAGAGTGGCACGGTG 173 Query 53619 AACAGCGTCATCCCTCCGGCAGTGCAGCACCTGACGGTGGAGGTGAGTGCAGCTGACAGC 53678 || | |||| || || || |||||||||||||| | || || | ||||| ||||| Sbjct 172 AATGGTGTCACGCCGCCAGCGGTGCAGCACCTGACCGCAGAAGTCACTGCAG---ACAGC 116 Query 53679 CAG---TATCTGGCACAGGCGAAATGGGACACGCCGCGGGTGGTGAAGGGGGTGCGCTTC 53735 | |||| || | |||| ||||||||| ||| |||||||||||| ||| | ||| Sbjct 115 GGGGAATATCAGGTGCTGGCGCGATGGGACACACCGAAGGTGGTGAAGGGCGTGAGTTTC 56 Query 53736 AGTCTGCGACTGACC 53750 || || |||||| Sbjct 55 CTGCTCCGTCTGACC 41 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 198688474770480