Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Dirofilaria_20immitis_20[genbank_20GCA_5F001077395.1_202013-08-23]
25,560 sequences; 84,888,114 total letters
Query= NC_013797.1
Length=108592
Score E
Sequences producing significant alignments: (Bits) Value
seq3028 100 2e-16
>seq3028
Length=62347
Score = 100 bits (110), Expect = 2e-16
Identities = 163/233 (70%), Gaps = 4/233 (2%)
Strand=Plus/Plus
Query 39489 ATCGCCGCCTCGCAAACGCAGTACCAAATGCAAAGTGCTTTCTTTTTGTATATTATAATC 39548
|| ||| || || | ||| || ||||| || | || ||| || || |||||||||||
Sbjct 28086 ATAGCCACCACGAAGACGAAGAACCAAGTGAAGCGTCGATTCCTTCTGAATATTATAATC 28145
Query 39549 GGCCAAAACG--CGTTCATCGTCCAATTGTTTCCCGCCAAAAATTAAACGCTGCTGATCC 39606
| | |||| || |||| |||| ||| |||||| |||| || | ||||| || ||
Sbjct 28146 --CGATAACGTACGACCATCCTCCAGTTGCTTCCCGGCAAAGATCAGTCGCTGTTGGTCT 28203
Query 39607 GAGGGTACGCCTTCTTTGTCGCATATTTTTTGTTTAATCGTCGCTACTGTGTCTGCGCTT 39666
| || | || || ||||| |||||| ||||| || | | || || | |
Sbjct 28204 GGTGGAATACCCTCCTTGTCTTGGATTTTTGCTTTAACATTCTCGATCGTATCCGATGCT 28263
Query 39667 TCCACGTCCAAAGTAATTGTTTTACCCGTTAAAGTTTTTACGAAGATCTGCAT 39719
||||| ||||| || || ||||||||||| |||||||| ||||| || |||||
Sbjct 28264 TCCACTTCCAACGTTATGGTTTTACCCGTCAAAGTTTTCACGAAAATTTGCAT 28316
Score = 91.5 bits (100), Expect = 1e-13
Identities = 103/138 (75%), Gaps = 0/138 (0%)
Strand=Plus/Plus
Query 39584 CAAAAATTAAACGCTGCTGATCCGAGGGTACGCCTTCTTTGTCGCATATTTTTTGTTTAA 39643
||||||| | ||||| ||||||| || | ||||| ||||| ||| ||| |||||
Sbjct 29609 CAAAAATCAGGCGCTGTTGATCCGGTGGAATACCTTCCTTGTCTTGTATCTTTGCTTTAA 29668
Query 39644 TCGTCGCTACTGTGTCTGCGCTTTCCACGTCCAAAGTAATTGTTTTACCCGTTAAAGTTT 39703
|| | | ||||||| |||||| || | ||||||||||| ||||| || ||||
Sbjct 29669 CATTCTCAATCGTGTCTGAAGCTTCCACTTCTAGCGTAATTGTTTTTCCCGTCAATGTTT 29728
Query 39704 TTACGAAGATCTGCATGT 39721
|||||||||| |||||||
Sbjct 29729 TTACGAAGATTTGCATGT 29746
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 347261390027480
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |