Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Dirofilaria_20immitis_20[genbank_20GCA_5F001077395.1_202013-08-23]
25,560 sequences; 84,888,114 total letters
Query= NC_014637.1
Length=617453
Score E
Sequences producing significant alignments: (Bits) Value
seq616 174 6e-38
seq156 161 4e-34
seq10840 141 4e-28
seq3028 129 2e-24
seq1448 109 2e-18
seq11064 86.0 2e-11
>seq616
Length=68005
Score = 174 bits (192), Expect = 6e-38
Identities = 171/221 (77%), Gaps = 0/221 (0%)
Strand=Plus/Plus
Query 451232 AAAACTTTTGCTCCTGAAGAAATTTCATCTATGGTTCTTACTAAAATGAAAGAAACAGCA 451291
||||| || |||||||| ||||||||| | |||||||| ||||||||| |||| |||
Sbjct 31483 AAAACCTTCGCTCCTGAGGAAATTTCAGCAATGGTTCTCGGTAAAATGAAGGAAATTGCA 31542
Query 451292 GAACAATATATTGGTTCTCCAGTTACTGATGCAGTAATTACTGTTCCCGCTTATTTCAAT 451351
||| ||| | || ||| | ||||||| |||| || |||||||| || |||
Sbjct 31543 GAAGCATACTTGGGAAAAGAAGTAAAACATGCAGTTGTTACAGTGCCCGCTTACTTTAAT 31602
Query 451352 GATGCACAACGGCAAGCAACTAAAGATGCAGGACATATTGCTGGTTTAAATGTTCTTCGA 451411
||||||||||| ||||| || ||||||||||| |||||| ||| | |||||| ||||
Sbjct 31603 GATGCACAACGACAAGCTACCAAAGATGCAGGTACTATTGCCGGTCTCAATGTTGTTCGT 31662
Query 451412 ATTATTAATGAACCTACAGCAGCTGCTCTAGCATATGGACT 451452
|| || |||||||||||||| |||||| | || ||||| ||
Sbjct 31663 ATCATCAATGAACCTACAGCTGCTGCTATCGCTTATGGGCT 31703
Score = 86.0 bits (94), Expect = 2e-11
Identities = 125/174 (72%), Gaps = 2/174 (1%)
Strand=Plus/Plus
Query 452315 CCTCAAATTGAAATTACCTATGATGTTGATGCAAATGGTATTCTTAATGTGAGTGCAGTT 452374
|| ||||| ||| |||| | ||| | |||| ||||| ||||| | || | ||||
Sbjct 33341 CCGCAAATCGAAGTTACTTTTGAAATCGATGTGAATGGCATTCTGCACGTCACGGCAGAG 33400
Query 452375 GAAAAATCATCTGGAAAATCAGAA-AAAATTACAATTACTAATGATAAAAACCGTTTATC 452433
|| ||| | ||||| |||| |||||||| ||||| |||||| | |||||||| ||
Sbjct 33401 GATAAAGGTACAGGAAACA-AGAATAAAATTACGATTACAAATGATCATAACCGTTTGTC 33459
Query 452434 TAAAGAAGATATTGAAAAAATGGTAGATGAAGCAGAAAAATTCAAGGATGATGA 452487
|||||||||||||| ||| | | || ||||| |||||| ||||| ||
Sbjct 33460 ACCAGAAGATATTGAAAGGATGATCAACGATGCAGAGAAATTCGCTGATGAAGA 33513
>seq156
Length=140780
Score = 161 bits (178), Expect = 4e-34
Identities = 181/242 (75%), Gaps = 0/242 (0%)
Strand=Plus/Plus
Query 451208 CAAGTAAATTATAAAGGTGAAACTAAAACTTTTGCTCCTGAAGAAATTTCATCTATGGTT 451267
||||| | || || || ||||| ||||| || | || |||||||||||||| ||||||
Sbjct 84546 CAAGTTGAATACAAGGGCGAAACGAAAACCTTCACACCAGAAGAAATTTCATCGATGGTT 84605
Query 451268 CTTACTAAAATGAAAGAAACAGCAGAACAATATATTGGTTCTCCAGTTACTGATGCAGTA 451327
| ||| ||||| |||||||| ||| || | | ||| | | || | ||||| |||
Sbjct 84606 TTGGTTAAGATGAAGGAAACAGCTGAAGCATTTCTCGGTCATGCGGTCAAAGATGCTGTA 84665
Query 451328 ATTACTGTTCCCGCTTATTTCAATGATGCACAACGGCAAGCAACTAAAGATGCAGGACAT 451387
|| || || ||||| ||||| || || ||||||| || ||||| |||||| | ||
Sbjct 84666 ATCACAGTCCCCGCATATTTTAACGACTCACAACGACAGGCAACGAAAGATTCTGGTGCA 84725
Query 451388 ATTGCTGGTTTAAATGTTCTTCGAATTATTAATGAACCTACAGCAGCTGCTCTAGCATAT 451447
||||||||||| ||||| || || ||||| || ||||| || ||||||||| | || |||
Sbjct 84726 ATTGCTGGTTTGAATGTCCTGCGTATTATCAACGAACCAACTGCAGCTGCTATTGCTTAT 84785
Query 451448 GG 451449
||
Sbjct 84786 GG 84787
>seq10840
Length=643
Score = 141 bits (156), Expect = 4e-28
Identities = 117/143 (82%), Gaps = 0/143 (0%)
Strand=Plus/Plus
Query 391050 ATGAATATTTTCGTTAAAACACTGACTGGTAAAACTATTACTCTTGATGTTGAATCATCT 391109
||| | || ||||| |||||||| ||||||||||| ||||||||||| || ||||| |||
Sbjct 1 ATGCAAATATTCGTGAAAACACTAACTGGTAAAACGATTACTCTTGAGGTAGAATCGTCT 60
Query 391110 GATAACATTGAAGCTATTAAACAAAAAATTCAAGATAAGGAAGGAATTCCTCCTGATCAA 391169
|||| |||||| | | ||| ||||||||||||||||| || ||||| |||||||||
Sbjct 61 GATACCATTGAGAATGTGAAAGCTAAAATTCAAGATAAGGAGGGCATTCCACCTGATCAA 120
Query 391170 CAACGTTTAATTTTCTCAGGGAA 391192
||||| | |||||| |||| ||
Sbjct 121 CAACGACTTATTTTCGCAGGTAA 143
>seq3028
Length=62347
Score = 129 bits (142), Expect = 2e-24
Identities = 154/209 (74%), Gaps = 0/209 (0%)
Strand=Plus/Minus
Query 391050 ATGAATATTTTCGTTAAAACACTGACTGGTAAAACTATTACTCTTGATGTTGAATCATCT 391109
||| | |||||||| ||||| |||| |||||||| || || | || || ||| ||||
Sbjct 28316 ATGCAAATTTTCGTGAAAACTTTGACGGGTAAAACCATAACGTTGGAAGTGGAAGCATCG 28257
Query 391110 GATAACATTGAAGCTATTAAACAAAAAATTCAAGATAAGGAAGGAATTCCTCCTGATCAA 391169
|||| || || | ||||| |||||| ||||| ||||| || ||||| || || |||
Sbjct 28256 GATACGATCGAGAATGTTAAAGCAAAAATCCAAGACAAGGAGGGTATTCCACCAGACCAA 28197
Query 391170 CAACGTTTAATTTTCTCAGGGAAACAACTTGAAGATGGAAGAACTTTGGCGGATTATAAT 391229
|| || | || || | ||||| ||||| || ||||| | || || |||||||||||
Sbjct 28196 CAGCGACTGATCTTTGCCGGGAAGCAACTGGAGGATGGTCGTACGTTATCGGATTATAAT 28137
Query 391230 ATTGATAAGGATGCAACACTTCACTTAGT 391258
||| | ||||| | || |||||||| ||
Sbjct 28136 ATTCAGAAGGAATCGACGCTTCACTTGGT 28108
Score = 100 bits (110), Expect = 1e-15
Identities = 103/135 (76%), Gaps = 0/135 (0%)
Strand=Plus/Minus
Query 391050 ATGAATATTTTCGTTAAAACACTGACTGGTAAAACTATTACTCTTGATGTTGAATCATCT 391109
||| | ||||| || |||||| |||| || ||||| || || | || |||||| | |||
Sbjct 28969 ATGCAAATTTTTGTGAAAACATTGACGGGCAAAACAATCACCTTAGAGGTTGAAGCCTCT 28910
Query 391110 GATAACATTGAAGCTATTAAACAAAAAATTCAAGATAAGGAAGGAATTCCTCCTGATCAA 391169
|||| || ||| | | ||| ||||||||||| ||||||||||| || || |||||
Sbjct 28909 GATACAATCGAAAATGTGAAAGCCAAAATTCAAGACAAGGAAGGAATCCCACCAGATCAG 28850
Query 391170 CAACGTTTAATTTTC 391184
|||||| | ||||||
Sbjct 28849 CAACGTCTTATTTTC 28835
Score = 86.0 bits (94), Expect = 2e-11
Identities = 103/140 (74%), Gaps = 0/140 (0%)
Strand=Plus/Minus
Query 391050 ATGAATATTTTCGTTAAAACACTGACTGGTAAAACTATTACTCTTGATGTTGAATCATCT 391109
||| | |||||||| || ||||| ||||| ||||| || || || || || ||| | ||
Sbjct 28659 ATGCAGATTTTCGTCAAGACACTTACTGGCAAAACCATAACACTGGAAGTAGAAGCCTCA 28600
Query 391110 GATAACATTGAAGCTATTAAACAAAAAATTCAAGATAAGGAAGGAATTCCTCCTGATCAA 391169
|||| || || | | || ||||||||||| ||||| || || |||||||||||
Sbjct 28599 GATACTATCGAGAATGTAAAGGCCAAAATTCAAGACAAGGAGGGCATCCCTCCTGATCAG 28540
Query 391170 CAACGTTTAATTTTCTCAGG 391189
||||| | ||||| ||||
Sbjct 28539 CAACGCCTTATTTTTGCAGG 28520
>seq1448
Length=39285
Score = 109 bits (120), Expect = 2e-18
Identities = 108/140 (77%), Gaps = 0/140 (0%)
Strand=Plus/Plus
Query 391050 ATGAATATTTTCGTTAAAACACTGACTGGTAAAACTATTACTCTTGATGTTGAATCATCT 391109
||| | ||||| || |||||| | |||||||| || ||||| ||||| || ||||| ||
Sbjct 34733 ATGCAAATTTTTGTAAAAACATTAACTGGTAAGACGATTACGCTTGAAGTCGAATCCTCG 34792
Query 391110 GATAACATTGAAGCTATTAAACAAAAAATTCAAGATAAGGAAGGAATTCCTCCTGATCAA 391169
|||| |||||| | | ||| || ||||| ||||||||||| || ||||| |||||
Sbjct 34793 GATACTATTGAAAATGTAAAAGCGAAGATTCAGGATAAGGAAGGCATACCTCCAGATCAG 34852
Query 391170 CAACGTTTAATTTTCTCAGG 391189
||||| || ||||| ||||
Sbjct 34853 CAACGATTGATTTTTGCAGG 34872
>seq11064
Length=1787
Score = 86.0 bits (94), Expect = 2e-11
Identities = 64/74 (86%), Gaps = 2/74 (3%)
Strand=Plus/Plus
Query 509506 GCCTTATTAGCTCAGTTGGATTAGAGCAGCAGGCTTTTAACCTGATGGTCGTGGGTTCGA 509565
||||| |||||||||||| ||||||| ||| ||||||| |||| ||||||||||||||
Sbjct 884 GCCTTCCTAGCTCAGTTGG--TAGAGCATCAGACTTTTAATCTGAGGGTCGTGGGTTCGA 941
Query 509566 GTCCCACATAAGGC 509579
||||||| |||||
Sbjct 942 GTCCCACGGAAGGC 955
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1975071376920480
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |