Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Dirofilaria_20immitis_20[genbank_20GCA_5F001077395.1_202013-08-23]
25,560 sequences; 84,888,114 total letters
Query= NC_014649.1
Length=1181549
Score E
Sequences producing significant alignments: (Bits) Value
seq156 183 2e-40
seq616 158 9e-33
seq1352 87.8 1e-11
>seq156
Length=140780
Score = 183 bits (202), Expect = 2e-40
Identities = 264/370 (71%), Gaps = 7/370 (2%)
Strand=Plus/Minus
Query 518165 TTTTTATCAAGACCATACGCAAAAGCAGCAGCAGTTGGTTCATTAATAATTCTCAAAACA 518224
||||| || | |||||| |||| |||||| ||||||||||| || ||||| | || |||
Sbjct 84799 TTTTTGTCCAAACCATAAGCAATAGCAGCTGCAGTTGGTTCGTTGATAATACGCAGGACA 84740
Query 518225 TTAAGACCAGCAATTCTTCCTGCATCTTTAGTGGCTTGTCTTTGTGAATCGTTAAAATAT 518284
|| | |||||||||| || | |||||| || || |||| |||||| ||||||||||||
Sbjct 84739 TTCAAACCAGCAATTGCACCAGAATCTTTCGTTGCCTGTCGTTGTGAGTCGTTAAAATAT 84680
Query 518285 GCAGGAACAGTAATAACGGCATCAGTTACTTCTTTACCAATATAAGCGCTTGCCGTTTGT 518344
|| || || || || || ||||| | || | | ||| | | | || || ||||
Sbjct 84679 GCGGGGACTGTGATTACAGCATCTTTGACCGCATGACCGAGAAATGCTTCAGCTGTTTCC 84620
Query 518345 TTCATTTTACTTAAAATCATTGATGAAATTTGTTCTG--GGGAATATTGCTTGGATTCAT 518402
||||| ||| |||| ||| |||||||||| ||||| | ||| || || | |||
Sbjct 84619 TTCATCTTAACCAAAACCATCGATGAAATTTCTTCTGGTGTGAAGGTT--TTCGTTTCGC 84562
Query 518403 TTTGATATGATACTTCAAAATATGGTTT---ATTACCAACATTAATAACTTTAAATGGCC 518459
| ||| |||| | | |||||| | |||| |||| || ||||| |||||||
Sbjct 84561 CCTTGTATTCAACTTGCACTTTTGGTTTACCACCACCAGCATTCATGACTTTGAATGGCC 84502
Query 518460 AGTATTTCATATCTGATTGAACACTTTGGTCATTAAAATCTCTACCAATTAATCGTTTTG 518519
||| |||||||||||| || || |||| ||| | | |||||| |||||||| |
Sbjct 84501 AGTGTTTCATATCTGACTGTACTGACCCATCATCAAACTTACGACCAATCAATCGTTTCG 84442
Query 518520 CATCAAAAAT 518529
|||| ||||
Sbjct 84441 CATCTGAAAT 84432
Score = 107 bits (118), Expect = 1e-17
Identities = 179/259 (69%), Gaps = 0/259 (0%)
Strand=Plus/Minus
Query 517626 CTTCATCAGGATTAACAGTTTCATTTAGTTTTTTACCATTGAAAAAATTTGAAAGAAGTT 517685
||||||| ||||| | ||| ||| |||| ||| ||| || |||| |||||| || |
Sbjct 85647 CTTCATCTGGATTGATGCTTTTATTGAGTTCTTTGCCAGAAAAGAAATCTGAAAGCAGCT 85588
Query 517686 GTCTTACCTTAGGAATACGAGATGATCCTCCAACTAATACAATTTCATGCACCTGTGATT 517745
| || || |||||||| | ||||| || ||||||||||| |||||||| || | ||
Sbjct 85587 TTTGCACTTTTGGAATACGGGTCGATCCACCTACTAATACAATATCATGCACTTGGGCTT 85528
Query 517746 TATCCAGTTTTGAATCCAATAAAACTTTTTCAACGGGTTCAAGACCCGCTCTAAACAAGT 517805
|||||| || | || | |||| ||||| || || | | | || | |
Sbjct 85527 TATCCATCTTAGCGTCTCGCAGTGCTTTCTCAACCGGATCCATGGTTGAACGGAAGAGAT 85468
Query 517806 CTGAACAAAGTTCTTCGAATTTAGCTCTAGTAAGAGTGACATTATAATCAATTCCTTCGA 517865
| | |||||||||||| || ||| | |||| || || | | |||||||| ||||
Sbjct 85467 CAGCACAAAGTTCTTCAAAACGAGCACGCGTAATGTTGGTATAAAAGTCAATTCCCTCGA 85408
Query 517866 ACAAAGAATCAACTTCAAT 517884
|||| ||||||| ||| ||
Sbjct 85407 ACAACGAATCAATTTCGAT 85389
Score = 96.9 bits (106), Expect = 3e-14
Identities = 183/266 (69%), Gaps = 9/266 (3%)
Strand=Plus/Minus
Query 517141 ATCTGCTTCTTCAAATTCTTTAGCTTCTCTAATCATTCTCTCAATTTGATCTTCAGAGAA 517200
|||||| ||| | ||| || |||||| | ||||| |||||| | ||| | || ||
Sbjct 86362 ATCTGC--CTT-ATATTTTTCAGCTTCCTGCACCATTCGCTCAATCTCATCCTTTGACAA 86306
Query 517201 TCTTCCGCGATTATTAGTAATAGTAATATTCTTGGATTTGTTTGTTGATTTATC---AGC 517257
| ||| || ||| ||||||||||| || || || ||| ||||| || |||
Sbjct 86305 ACGTCCCTTATCATTGGTAATAGTAATCTTATTCTGCTTTCCTGTCGATTTGTCTTGAGC 86246
Query 517258 GGCAGTCACATTAAGAATACCATTGGCATCCAAATCAAATGTGACTTCAATTTGAGGGAC 517317
|| | ||||| |||||||| || ||||| | ||| || || ||||||||||| || ||
Sbjct 86245 GGAA---ACATTCAGAATACCGTTCGCATCAATATCGAAAGTAACTTCAATTTGCGGCAC 86189
Query 517318 CCCTCTCTGAGCAGGTGGGATCCCTTCCAAATTAAATGTTCCCAGATTATTATTATCTTT 517377
|| | |||||||||| || || || | ||| |||| || |||||| || ||
Sbjct 86188 GCCACGAGGAGCAGGTGGAATTCCAGATAATTCGAATTTTCCAAGCAAATTATTGTCCTT 86129
Query 517378 AGTGAATTTTCGTTCACCCTCGAAAA 517403
|| | |||||||| ||| |||
Sbjct 86128 TGTCATAGCACGTTCACCTTCGTAAA 86103
Score = 87.8 bits (96), Expect = 1e-11
Identities = 98/131 (75%), Gaps = 0/131 (0%)
Strand=Plus/Minus
Query 322241 AAACCGTATGCAAGAGCTGCTGCAGTTGGTTCATTAATTATTTTAAGAACATCTAAACCC 322300
||||| || |||| ||| |||||||||||||| || || || || |||| |||||
Sbjct 84790 AAACCATAAGCAATAGCAGCTGCAGTTGGTTCGTTGATAATACGCAGGACATTCAAACCA 84731
Query 322301 GCAATTTTAGCAGAATCAAGAGTTGCTTGTCTCTGTGCGTCATTAAAATATGCTGGTACA 322360
|||||| | ||||||| ||||| |||| |||| ||| ||||||||||| || ||
Sbjct 84730 GCAATTGCACCAGAATCTTTCGTTGCCTGTCGTTGTGAGTCGTTAAAATATGCGGGGACT 84671
Query 322361 GTAATAACTGC 322371
|| || || ||
Sbjct 84670 GTGATTACAGC 84660
>seq616
Length=68005
Score = 158 bits (174), Expect = 9e-33
Identities = 167/220 (76%), Gaps = 0/220 (0%)
Strand=Plus/Minus
Query 518156 TTGTCTTGGTTTTTATCAAGACCATACGCAAAAGCAGCAGCAGTTGGTTCATTAATAATT 518215
||| ||| |||||||| || ||||| || | ||||||||| || |||||||| || ||
Sbjct 31721 TTGCCTTCCTTTTTATCCAGCCCATAAGCGATAGCAGCAGCTGTAGGTTCATTGATGATA 31662
Query 518216 CTCAAAACATTAAGACCAGCAATTCTTCCTGCATCTTTAGTGGCTTGTCTTTGTGAATCG 518275
| | |||||| ||||| ||||| | ||||||||||| || ||||||| ||||| |||
Sbjct 31661 CGAACAACATTGAGACCGGCAATAGTACCTGCATCTTTGGTAGCTTGTCGTTGTGCATCA 31602
Query 518276 TTAAAATATGCAGGAACAGTAATAACGGCATCAGTTACTTCTTTACCAATATAAGCGCTT 518335
||||| || || || || |||| ||| |||| |||||||||| || | || || |
Sbjct 31601 TTAAAGTAAGCGGGCACTGTAACAACTGCATGTTTTACTTCTTTTCCCAAGTATGCTTCT 31542
Query 518336 GCCGTTTGTTTCATTTTACTTAAAATCATTGATGAAATTT 518375
|| ||| |||||||||| | || ||||| ||||||||
Sbjct 31541 GCAATTTCCTTCATTTTACCGAGAACCATTGCTGAAATTT 31502
>seq1352
Length=23028
Score = 87.8 bits (96), Expect = 1e-11
Identities = 111/153 (73%), Gaps = 0/153 (0%)
Strand=Plus/Plus
Query 668854 AGGTAAAGAAGGTCGTATTAGAGGAAATTTGATGGGAAAACGTGTCGATATGTCTGCACG 668913
||| |||||||| || |||||||||||||| ||||| ||||| || ||| | || || ||
Sbjct 4532 AGGAAAAGAAGGCCGAATTAGAGGAAATTTAATGGGCAAACGAGTGGATTTCTCGGCTCG 4591
Query 668914 TACAGTTATTACTTCTGATCCCAATATTGCTCTCAATGAAGTTGGTGTTCCTCTTATTAT 668973
|| || ||||| | ||||| ||| | | | || |||||| || |||| | |||
Sbjct 4592 AACCGTAATTACACCAGATCCAAATCTGCCCATAGATACAGTTGGCGTGCCTCGCACTAT 4651
Query 668974 TGCTAAAAATCTTACTTTTGACGAAATTGTAAC 669006
||| ||||| | || || |||||||| ||
Sbjct 4652 TGCACAAAATATGACATTCCCAGAAATTGTTAC 4684
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 3779554028605360
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |