Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Dirofilaria_20immitis_20[genbank_20GCA_5F001077395.1_202013-08-23]
25,560 sequences; 84,888,114 total letters
Query= NC_014765.1
Length=198519
Score E
Sequences producing significant alignments: (Bits) Value
seq156 158 2e-33
seq616 131 2e-25
seq2995 82.4 1e-10
>seq156
Length=140780
Score = 158 bits (174), Expect = 2e-33
Identities = 189/257 (74%), Gaps = 0/257 (0%)
Strand=Plus/Minus
Query 7058 TCATCGGGGTTAATCGTTTTATTCAGTTCTTTACCGTTAAAATAATCCGATAACATTTGT 7117
||||| || || || ||||||| |||||||| || ||| |||| || | || | |
Sbjct 85645 TCATCTGGATTGATGCTTTTATTGAGTTCTTTGCCAGAAAAGAAATCTGAAAGCAGCTTT 85586
Query 7118 TGAATTTTCGGGATTCGTGTCGATCCACCGACCAAAACGATTTCATTCACTTTCGATTTA 7177
|| | ||| || || || ||||||||||| || || || || |||| ||||| | ||||
Sbjct 85585 TGCACTTTTGGAATACGGGTCGATCCACCTACTAATACAATATCATGCACTTGGGCTTTA 85526
Query 7178 TCGATCTTTGAGTCTCGAAGTGTTTTTTCGACAGGTTCCATACATTTACGGAACAAGTCC 7237
|| ||||| | |||||| |||| ||| || || || ||||| | |||||| | ||
Sbjct 85525 TCCATCTTAGCGTCTCGCAGTGCTTTCTCAACCGGATCCATGGTTGAACGGAAGAGATCA 85466
Query 7238 ATACACAGTTCCTCAAAACGTGCACGGGTAATGGATGTATAGAAATCAACGCCGTCGTAT 7297
||| ||||| |||||||| ||||| |||||| ||||| || |||| || ||| |
Sbjct 85465 GCACAAAGTTCTTCAAAACGAGCACGCGTAATGTTGGTATAAAAGTCAATTCCCTCGAAC 85406
Query 7298 AACGAATCAATTTCAAT 7314
|||||||||||||| ||
Sbjct 85405 AACGAATCAATTTCGAT 85389
Score = 132 bits (146), Expect = 6e-26
Identities = 218/312 (70%), Gaps = 2/312 (1%)
Strand=Plus/Minus
Query 7595 TTCTTATCGAGACCGTACGCGATAGCCGCCGCCGTTGGTTCATTAATAATACGAAG-ACA 7653
|| || || | ||| || || ||||| || || |||||||| || |||||||| || |||
Sbjct 84799 TTTTTGTCCAAACCATAAGCAATAGCAGCTGCAGTTGGTTCGTTGATAATACGCAGGACA 84740
Query 7654 GTTCAGGCCAGCAATAGTTGCCGCATCTTTCGTCGCTTGTCGTTGCGAATCGTTAAAGTA 7713
|||| |||||||| | | | ||||||||| || |||||||| || |||||||| ||
Sbjct 84739 -TTCAAACCAGCAATTGCACCAGAATCTTTCGTTGCCTGTCGTTGTGAGTCGTTAAAATA 84681
Query 7714 GGCCGGGACCGTTACGACCGCGTCCGTGACTTTCTTACCGAGATACGATTCCGCGATATC 7773
|| ||||| || | || || || |||| | ||||||| | | ||| || | ||
Sbjct 84680 TGCGGGGACTGTGATTACAGCATCTTTGACCGCATGACCGAGAAATGCTTCAGCTGTTTC 84621
Query 7774 TTTCATTTTGGTAAGAACCATCGATGAAATCTCTTCAGCCGCAAACTGTTTCGTTTCACC 7833
||||| || | ||||||||||||||| ||||| | | || ||||||||| ||
Sbjct 84620 CTTCATCTTAACCAAAACCATCGATGAAATTTCTTCTGGTGTGAAGGTTTTCGTTTCGCC 84561
Query 7834 GTTAAAATCAACTTCAATCATGGGTTTATCCGCAGCACCGGGGATAACCTTATACGACCA 7893
|| | ||||||| | | |||||| | || || | || || || | | |||
Sbjct 84560 CTTGTATTCAACTTGCACTTTTGGTTTACCACCACCAGCATTCATGACTTTGAATGGCCA 84501
Query 7894 ATCTTTCATATC 7905
| |||||||||
Sbjct 84500 GTGTTTCATATC 84489
Score = 125 bits (138), Expect = 9e-24
Identities = 239/345 (69%), Gaps = 14/345 (4%)
Strand=Plus/Minus
Query 6497 TCGACCGTTCCTTTCAT-TTGATAACAGTAGTTTTCGAGACCATTCTTCGCCTC-----G 6550
|||| |||| |||||| |||| || || || ||||| |||| ||||| | |
Sbjct 86439 TCGATCGTTTGTTTCATATTGAACGCATAAGATT-CGAGAGCATTTTTCGCTGCAATGCG 86381
Query 6551 ACCTTTTTCGCGTACTTTTCATCTTCATCTTTATACTTTTCCGCATCTTGGACCATCTTT 6610
| |||| | ||| |||||| || | ||||| ||||| || || || |||||
Sbjct 86380 ATCTTTCT-GCGC----TTCATCATCTGCCTTATATTTTTCAGCTTCCTGCACCATTCGC 86326
Query 6611 TCAATGTCTTCTTTCGATAATCTCCCCTTATCATTCGTAATCGTAATCTT-TTCGGATTT 6669
||||| || || || || || | ||||||||||| ||||| |||||||| ||| | |||
Sbjct 86325 TCAATCTCATCCTTTGACAAACGTCCCTTATCATTGGTAATAGTAATCTTATTCTGCTTT 86266
Query 6670 ACCCGAGGCCTTATCTTCAGCACTTACATTCAAAATACCATTTGCATCAACATCGAACCT 6729
|| | | || |||| ||| ||||||| |||||| || ||||||| |||||| |
Sbjct 86265 -CCTGTCGATTTGTCTTGAGCGGAAACATTCAGAATACCGTTCGCATCAATATCGAAAGT 86207
Query 6730 TACATTAATTTGTGGTGTACCCCTCGGTGCGGCTGGAATACCCGTTAAATCAAATGTACC 6789
|| | |||||| || || | || || | |||||| || | ||| || ||| | ||
Sbjct 86206 AACTTCAATTTGCGGCACGCCACGAGGAGCAGGTGGAATTCCAGATAATTCGAATTTTCC 86147
Query 6790 AAGTAAACTGTTATCCGTCGCCTTCTTACGTTCACCTTCATAGAC 6834
||| ||| | || ||| | | | | |||||||||||| || ||
Sbjct 86146 AAGCAAATTATTGTCCTTTGTCATAGCACGTTCACCTTCGTAAAC 86102
>seq616
Length=68005
Score = 131 bits (144), Expect = 2e-25
Identities = 159/217 (73%), Gaps = 0/217 (0%)
Strand=Plus/Minus
Query 7595 TTCTTATCGAGACCGTACGCGATAGCCGCCGCCGTTGGTTCATTAATAATACGAAGACAG 7654
|| ||||| || || || |||||||| || || || |||||||| || ||||||| |
Sbjct 31712 TTTTTATCCAGCCCATAAGCGATAGCAGCAGCTGTAGGTTCATTGATGATACGAACAACA 31653
Query 7655 TTCAGGCCAGCAATAGTTGCCGCATCTTTCGTCGCTTGTCGTTGCGAATCGTTAAAGTAG 7714
|| || || |||||||| | |||||||| || ||||||||||| | ||| ||||||||
Sbjct 31652 TTGAGACCGGCAATAGTACCTGCATCTTTGGTAGCTTGTCGTTGTGCATCATTAAAGTAA 31593
Query 7715 GCCGGGACCGTTACGACCGCGTCCGTGACTTTCTTACCGAGATACGATTCCGCGATATCT 7774
|| || || || || || || | | |||| || || | || | ||| || || ||
Sbjct 31592 GCGGGCACTGTAACAACTGCATGTTTTACTTCTTTTCCCAAGTATGCTTCTGCAATTTCC 31533
Query 7775 TTCATTTTGGTAAGAACCATCGATGAAATCTCTTCAG 7811
|||||||| |||||||| | |||||| || ||||
Sbjct 31532 TTCATTTTACCGAGAACCATTGCTGAAATTTCCTCAG 31496
Score = 86.0 bits (94), Expect = 8e-12
Identities = 173/254 (68%), Gaps = 2/254 (1%)
Strand=Plus/Minus
Query 6587 TTTTCCGCATCTTGGACCATCTTTTCAATGTCTTCTTTCGATAATCTCCCCTTATCATTC 6646
|| || ||||| | || |||| ||||||| |||||| || || | | ||||||
Sbjct 33498 TTCTCTGCATCGTTGATCATCCTTTCAATATCTTCTGGTGACAAACGGTTATGATCATTT 33439
Query 6647 GTAATCGTAATCTT-TTCGGATTTACCCGAGGCCTTATCTTCAGCACTTACATTCAAAAT 6705
||||||||||| || ||| ||| || | | ||||| || || | || | || |||
Sbjct 33438 GTAATCGTAATTTTATTCTTGTTT-CCTGTACCTTTATCCTCTGCCGTGACGTGCAGAAT 33380
Query 6706 ACCATTTGCATCAACATCGAACCTTACATTAATTTGTGGTGTACCCCTCGGTGCGGCTGG 6765
||||| |||| | || || | || | ||||| ||| ||| | ||||| | |||
Sbjct 33379 GCCATTCACATCGATTTCAAAAGTAACTTCGATTTGCGGTACACCTCGGGGTGCTGGTGG 33320
Query 6766 AATACCCGTTAAATCAAATGTACCAAGTAAACTGTTATCCGTCGCCTTCTTACGTTCACC 6825
||||| || ||||||||| |||| || | |||||| ||| | | || || ||
Sbjct 33319 GATACCTGTCAAATCAAATTTACCCAGGATGTGGTTATCTTTCGTCATTGGCCGCTCGCC 33260
Query 6826 TTCATAGACTTTAA 6839
|||||| || ||||
Sbjct 33259 TTCATAAACCTTAA 33246
>seq2995
Length=21460
Score = 82.4 bits (90), Expect = 1e-10
Identities = 88/114 (77%), Gaps = 2/114 (2%)
Strand=Plus/Minus
Query 22423 GGTCTAACAAAAACGTGTAA-ATTTTATCAGGCATCTACATCAGAGCTCTACGGTAAAGT 22481
||| ||||||| | | |||| |||||||||||| || ||||| || || || |||||||
Sbjct 20506 GGTTTAACAAATA-GAGTAAGATTTTATCAGGCTTCAACATCTGAACTATATGGTAAAGC 20448
Query 22482 AAATGAAACTCCACAAAATGAAAATACACCGTTTTACCCGCGTTCACCATATGG 22535
| ||| || ||||| |||| ||||| ||||| || |||||||| |||||
Sbjct 20447 ACTGGAAGTGCCTCAAAAAGAAACGACACCCTTTTATCCTCGTTCACCTTATGG 20394
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 634929875070400
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |