Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dirofilaria_20immitis_20[genbank_20GCA_5F001077395.1_202013-08-23] 25,560 sequences; 84,888,114 total letters Query= NC_015398.1 Length=101487 Score E Sequences producing significant alignments: (Bits) Value seq3028 102 5e-17 >seq3028 Length=62347 Score = 102 bits (112), Expect = 5e-17 Identities = 151/212 (71%), Gaps = 4/212 (2%) Strand=Plus/Plus Query 34772 AACCAAGTGAATTGTGCTTTCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATC 34831 ||||||||||| || ||| |||||||| ||||| ||||| | | || |||| || Sbjct 28107 AACCAAGTGAAGCGTCGATTCCTTCTGAATATTATAATCCGATAACGTACGACCATCCTC 28166 Query 34832 CAGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCT 34891 ||| || || |||||||| || ||||| || |||||| | || | ||||||||||| Sbjct 28167 CAGTTGCTTCCCGGCAAAGATCAGTCGCTGTTGGTCTGGTGGAATACCCTCCTTGTCTTG 28226 Query 34892 AATCTTCTGTTTGACGGATGCT--ATCGATTCACCGGCCTCAACATCGACGGTTATGGTT 34949 || || ||| || || || |||| || || || || || | ||||||||| Sbjct 28227 GATTTTTGCTTTAAC--ATTCTCGATCGTATCCGATGCTTCCACTTCCAACGTTATGGTT 28284 Query 34950 TTTCCCGTGAGAGTCTTCACAAAGATCTGCAT 34981 || ||||| | ||| ||||| || || ||||| Sbjct 28285 TTACCCGTCAAAGTTTTCACGAAAATTTGCAT 28316 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 324532472575680