Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Dirofilaria_20immitis_20[genbank_20GCA_5F001077395.1_202013-08-23]
25,560 sequences; 84,888,114 total letters
Query= NC_015960.1
Length=175699
Score E
Sequences producing significant alignments: (Bits) Value
seq1462 84.2 2e-11
>seq1462
Length=36103
Score = 84.2 bits (92), Expect = 2e-11
Identities = 166/242 (69%), Gaps = 8/242 (3%)
Strand=Plus/Plus
Query 48114 GTATATAACTTCTCAAATTCATCCCCATACACATTATCTAACCCAGGACATTCATTAGGA 48173
||||| || ||||||||| | | || || || || ||||| ||||||||| |||
Sbjct 15495 GTATACAATTTCTCAAATGCCTTGCCCCACGAATCTTCCAACCCTGGACATTCAGCTGGA 15554
Query 48174 CACATCAATGACCAATCCTCATCATTTTTTACTCTAGTCATAAATATATCTGGTATCCAA 48233
||||| |||||||| | ||| | || | ||| || | |||||||| |||
Sbjct 15555 CACATTAATGACCATATTTTATCGTCACGCACACGTTCCATGAAAAGATCTGGTACCCAT 15614
Query 48234 AGAGCTATAAATAAATCCCTA----GTTCTTAGTTCTTCATTGCCACTATTCCTTTTAAG 48289
| | | | |||||||| | | |||| ||||| ||| | || |||| || | ||
Sbjct 15615 AAACCAAGGAATAAATCACGACAACGTTCG-AGTTCATCAC--CTAC-ATTCTTTCTGAG 15670
Query 48290 TTCAAGAAAGTCCATTATATCAGCATGCCATGGTTCTAAATATATTGCCATTACACCTGG 48349
|| ||||| || | ||||| ||||||||||| || ||||| || || | | | |||||
Sbjct 15671 CTCTAGAAATTCAAAAATATCTGCATGCCATGGCTCCAAATAAATAGCAAATGCGCCTGG 15730
Query 48350 TC 48351
||
Sbjct 15731 TC 15732
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 561929206238400
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |