Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Dirofilaria_20immitis_20[genbank_20GCA_5F001077395.1_202013-08-23]
25,560 sequences; 84,888,114 total letters
Query= NC_018875.1
Length=119082
Score E
Sequences producing significant alignments: (Bits) Value
seq3028 131 1e-25
>seq3028
Length=62347
Score = 131 bits (144), Expect = 1e-25
Identities = 155/210 (74%), Gaps = 0/210 (0%)
Strand=Plus/Plus
Query 48558 ACCAAATGTAGCGTGCTCTCTTTTTGAATATTGTAATCAGATAGACTTCGATCGTCGTCC 48617
||||| || ||||| || || |||||||| ||||| |||| | ||| | || |||
Sbjct 28108 ACCAAGTGAAGCGTCGATTCCTTCTGAATATTATAATCCGATAACGTACGACCATCCTCC 28167
Query 48618 AACTGCTTACCGGCAAATATCAGTCGCTGTTGATCCGTGGGAACGCCCTCCTTGTCGCTA 48677
| ||||| |||||||| |||||||||||||| || | |||| |||||||||||
Sbjct 28168 AGTTGCTTCCCGGCAAAGATCAGTCGCTGTTGGTCTGGTGGAATACCCTCCTTGTCTTGG 28227
Query 48678 ATCTTTTGTTTTACAGAACCCACAGACTCTGACGCCTCCACCTCCACCGTAATCGTTTTT 48737
|| ||| ||| ||| | | | || || || ||||| |||| ||| || |||||
Sbjct 28228 ATTTTTGCTTTAACATTCTCGATCGTATCCGATGCTTCCACTTCCAACGTTATGGTTTTA 28287
Query 48738 CCCGTCAAAGTTTTTACAAAAATCTGCATC 48767
|||||||||||||| || ||||| ||||||
Sbjct 28288 CCCGTCAAAGTTTTCACGAAAATTTGCATC 28317
Score = 107 bits (118), Expect = 1e-18
Identities = 118/156 (76%), Gaps = 1/156 (1%)
Strand=Plus/Plus
Query 48625 TACCGGCAAATATCAGTCGCTGTTGATCCGTGGGAACGCCCTCCTTGTCGCTAATCTTTT 48684
|||| ||||| ||||| ||||||||||||| |||| || |||||||| ||||||
Sbjct 29603 TACCAGCAAAAATCAGGCGCTGTTGATCCGGTGGAATACCTTCCTTGTCTTGTATCTTTG 29662
Query 48685 GTTTTACAGAACCCACAGACTCTGACGCCTCCACCTCCACCGTAATCGTTTTTCCCGTCA 48744
||| ||| | | | ||||| || ||||| || | |||||| |||||||||||||
Sbjct 29663 CTTTAACATTCTCAATCGTGTCTGAAGCTTCCACTTCTAGCGTAATTGTTTTTCCCGTCA 29722
Query 48745 AAGTTTTTACAAAAATCTGCATCGTGTGTACGTGTA 48780
| |||||||| || || ||||| || || |||| ||
Sbjct 29723 ATGTTTTTACGAAGATTTGCAT-GTTTGCACGTATA 29757
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 380818933175880
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |