Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dirofilaria_20immitis_20[genbank_20GCA_5F001077395.1_202013-08-23] 25,560 sequences; 84,888,114 total letters Query= NC_019716.1 Length=44510 Score E Sequences producing significant alignments: (Bits) Value seq24227 392 9e-105 seq24591 338 2e-88 >seq24227 Length=246 Score = 392 bits (434), Expect = 9e-105 Identities = 234/245 (96%), Gaps = 0/245 (0%) Strand=Plus/Minus Query 15865 TGCGACCAGTCGGTGCCGGACGGTTTTGGCGGCACGGAGCCGCGCATCACCTGTAATGCC 15924 ||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct 245 TGCGACCAGTCAGTGCCGGACGGCTTTGGCGGCACGGAGCCGCGCATCACCTGTAATGCG 186 Query 15925 TGGCTGACCACACAGCGTAAGGCGTGGGATGTTCTCAGTGATTTCTGCTCGGCGATGCGC 15984 | ||||||||||||||||||||||||||||| ||||| ||||||||||||||||||||| Sbjct 185 TACCTGACCACACAGCGTAAGGCGTGGGATGTGCTCAGCGATTTCTGCTCGGCGATGCGC 126 Query 15985 TGTATGCCGGTATGGAACGGGCAGACGCTGACGTTCGTGCAGGACCGACCATCAGATAAG 16044 |||||||||||||||||||||||||||||||||||||||||||||||||| || |||||| Sbjct 125 TGTATGCCGGTATGGAACGGGCAGACGCTGACGTTCGTGCAGGACCGACCGTCGGATAAG 66 Query 16045 GTGTGGACCTATAACCGCAGTAATGTGGTGATGCCGGATGATGGCGCGCCGTTCCGCTAC 16104 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 65 ACGTGGACCTATAACCGCAGTAATGTGGTGATGCCGGATGATGGCGCGCCGTTCCGCTAC 6 Query 16105 AGCTT 16109 ||||| Sbjct 5 AGCTT 1 >seq24591 Length=232 Score = 338 bits (374), Expect = 2e-88 Identities = 214/232 (92%), Gaps = 0/232 (0%) Strand=Plus/Minus Query 16723 GAGAAAGAAGCCATCGTGGATAACGGGGCGCACTTTGACGGTGACCAGAGTGGCACGGTG 16782 || ||||| |||||||||||||||||||||||||||||||| || ||||||||||||||| Sbjct 232 GAAAAAGAGGCCATCGTGGATAACGGGGCGCACTTTGACGGCGAACAGAGTGGCACGGTG 173 Query 16783 AATGGTGTCACGCCGCCAGCAGTTCAGCACCTGACCGCAGAAGTCACCGCAGACAGCGGG 16842 |||||||||||||||||||| || ||||||||||||||||||||||| |||||||||||| Sbjct 172 AATGGTGTCACGCCGCCAGCGGTGCAGCACCTGACCGCAGAAGTCACTGCAGACAGCGGG 113 Query 16843 GAATACCAGGTGCTGGCGCGCTGGGACACGCCGAAGGTGGTGAAGGGGGTGAGCTTTATG 16902 ||||| |||||||||||||| |||||||| ||||||||||||||||| ||||| || || Sbjct 112 GAATATCAGGTGCTGGCGCGATGGGACACACCGAAGGTGGTGAAGGGCGTGAGTTTCCTG 53 Query 16903 CTTCGCCTGACCGTGGCAGCGGACGACGGCAGTGAGCGGCTGGTCAGCACGG 16954 || || |||||||| |||||||||||||||||||||||||||||||||||| Sbjct 52 CTCCGTCTGACCGTAACAGCGGACGACGGCAGTGAGCGGCTGGTCAGCACGG 1 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 142267205235840