Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Dirofilaria_20immitis_20[genbank_20GCA_5F001077395.1_202013-08-23]
25,560 sequences; 84,888,114 total letters
Query= NC_019716.1
Length=44510
Score E
Sequences producing significant alignments: (Bits) Value
seq24227 392 9e-105
seq24591 338 2e-88
>seq24227
Length=246
Score = 392 bits (434), Expect = 9e-105
Identities = 234/245 (96%), Gaps = 0/245 (0%)
Strand=Plus/Minus
Query 15865 TGCGACCAGTCGGTGCCGGACGGTTTTGGCGGCACGGAGCCGCGCATCACCTGTAATGCC 15924
||||||||||| ||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct 245 TGCGACCAGTCAGTGCCGGACGGCTTTGGCGGCACGGAGCCGCGCATCACCTGTAATGCG 186
Query 15925 TGGCTGACCACACAGCGTAAGGCGTGGGATGTTCTCAGTGATTTCTGCTCGGCGATGCGC 15984
| ||||||||||||||||||||||||||||| ||||| |||||||||||||||||||||
Sbjct 185 TACCTGACCACACAGCGTAAGGCGTGGGATGTGCTCAGCGATTTCTGCTCGGCGATGCGC 126
Query 15985 TGTATGCCGGTATGGAACGGGCAGACGCTGACGTTCGTGCAGGACCGACCATCAGATAAG 16044
|||||||||||||||||||||||||||||||||||||||||||||||||| || ||||||
Sbjct 125 TGTATGCCGGTATGGAACGGGCAGACGCTGACGTTCGTGCAGGACCGACCGTCGGATAAG 66
Query 16045 GTGTGGACCTATAACCGCAGTAATGTGGTGATGCCGGATGATGGCGCGCCGTTCCGCTAC 16104
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 65 ACGTGGACCTATAACCGCAGTAATGTGGTGATGCCGGATGATGGCGCGCCGTTCCGCTAC 6
Query 16105 AGCTT 16109
|||||
Sbjct 5 AGCTT 1
>seq24591
Length=232
Score = 338 bits (374), Expect = 2e-88
Identities = 214/232 (92%), Gaps = 0/232 (0%)
Strand=Plus/Minus
Query 16723 GAGAAAGAAGCCATCGTGGATAACGGGGCGCACTTTGACGGTGACCAGAGTGGCACGGTG 16782
|| ||||| |||||||||||||||||||||||||||||||| || |||||||||||||||
Sbjct 232 GAAAAAGAGGCCATCGTGGATAACGGGGCGCACTTTGACGGCGAACAGAGTGGCACGGTG 173
Query 16783 AATGGTGTCACGCCGCCAGCAGTTCAGCACCTGACCGCAGAAGTCACCGCAGACAGCGGG 16842
|||||||||||||||||||| || ||||||||||||||||||||||| ||||||||||||
Sbjct 172 AATGGTGTCACGCCGCCAGCGGTGCAGCACCTGACCGCAGAAGTCACTGCAGACAGCGGG 113
Query 16843 GAATACCAGGTGCTGGCGCGCTGGGACACGCCGAAGGTGGTGAAGGGGGTGAGCTTTATG 16902
||||| |||||||||||||| |||||||| ||||||||||||||||| ||||| || ||
Sbjct 112 GAATATCAGGTGCTGGCGCGATGGGACACACCGAAGGTGGTGAAGGGCGTGAGTTTCCTG 53
Query 16903 CTTCGCCTGACCGTGGCAGCGGACGACGGCAGTGAGCGGCTGGTCAGCACGG 16954
|| || |||||||| ||||||||||||||||||||||||||||||||||||
Sbjct 52 CTCCGTCTGACCGTAACAGCGGACGACGGCAGTGAGCGGCTGGTCAGCACGG 1
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 142267205235840
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |