Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dirofilaria_20immitis_20[genbank_20GCA_5F001077395.1_202013-08-23] 25,560 sequences; 84,888,114 total letters Query= NC_019717.1 Length=45366 Score E Sequences producing significant alignments: (Bits) Value seq20922 298 2e-76 >seq20922 Length=439 Score = 298 bits (330), Expect = 2e-76 Identities = 321/425 (76%), Gaps = 0/425 (0%) Strand=Plus/Minus Query 4693 TGGGCGCTGGCCAATGACATGAACTGCAGTGCAGGTCAGCTTATTGCCAGTTCGGCATCG 4752 |||||||| ||||| |||||||||||||||||||||||| | |||||||| | || || Sbjct 437 TGGGCGCTTGCCAACGACATGAACTGCAGTGCAGGTCAGTTGCTTGCCAGTGCCGCCTCC 378 Query 4753 CGACGGCTGGTCACACAAACGGCCAGAACCGGCTCCATTGGGGTCATGATGGCGCACAGT 4812 || || |||||||| || || ||| | || |||||||| || ||||||||||| |||||| Sbjct 377 CGGCGTCTGGTCACGCAGACCGCCCGGACAGGCTCCATCGGCGTCATGATGGCTCACAGT 318 Query 4813 AACTATGGCGCTGCGCTCAAAACTAACGGCGTTGAGGTCACGCTGATTTACAGCGGCGAT 4872 || || || |||||||| | | | || || || |||||||||||||||||||| Sbjct 317 AATTACGGTGCTGCGCTGGAGAAACAGGGTGTGGAAATCACGCTGATTTACAGCGGCAGC 258 Query 4873 CGCAAGGTCGACGGCAACCCTTACGAAAAGCTTCCGAAAGATGTGCGTGCTGATTTCCAG 4932 | ||||| || |||||||| ||| | |||||| | || || || | | ||| Sbjct 257 CATAAGGTGGATGGCAACCCCTACAGCCATCTTCCGGATGACGTCCGGGAGACACTGCAG 198 Query 4933 ACGCGTATCGATGCCACTCGTCAGATGTTTGCCGAAAAGGTTTCCGCTTATACCGGCATG 4992 | || || || || || || ||||||||||| | ||||| || || ||||||||| || Sbjct 197 TCCCGGATGGACGCAACCCGCCAGATGTTTGCGCAGAAGGTGTCGGCATATACCGGCCTG 138 Query 4993 TCTGTTCAGGACGTGCTGGACACCGAAGCGGCAGTATTCTCCGGCCAGGAATCTTTGGAT 5052 || || |||| |||||||| ||||| || ||||| | | ||| ||||| | | ||| Sbjct 137 TCCGTGCAGGTTGTGCTGGATACCGAGGCTGCAGTGTACAGCGGTCAGGAGGCCATTGAT 78 Query 5053 AACGGGCTGGCGGATGAACTTGTTAACAATACCGATGCGCTCGGCGTGATGCGCGAAGCA 5112 ||| ||||| |||||||||||||||| ||||||||| || ||| ||||| || ||| Sbjct 77 GCCGGACTGGCTGATGAACTTGTTAACAGCACCGATGCGATCACCGTCATGCGTGATGCA 18 Query 5113 CTCGA 5117 || || Sbjct 17 CTGGA 13 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 145005573820160