Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Dirofilaria_20immitis_20[genbank_20GCA_5F001077395.1_202013-08-23]
25,560 sequences; 84,888,114 total letters
Query= NC_019717.1
Length=45366
Score E
Sequences producing significant alignments: (Bits) Value
seq20922 298 2e-76
>seq20922
Length=439
Score = 298 bits (330), Expect = 2e-76
Identities = 321/425 (76%), Gaps = 0/425 (0%)
Strand=Plus/Minus
Query 4693 TGGGCGCTGGCCAATGACATGAACTGCAGTGCAGGTCAGCTTATTGCCAGTTCGGCATCG 4752
|||||||| ||||| |||||||||||||||||||||||| | |||||||| | || ||
Sbjct 437 TGGGCGCTTGCCAACGACATGAACTGCAGTGCAGGTCAGTTGCTTGCCAGTGCCGCCTCC 378
Query 4753 CGACGGCTGGTCACACAAACGGCCAGAACCGGCTCCATTGGGGTCATGATGGCGCACAGT 4812
|| || |||||||| || || ||| | || |||||||| || ||||||||||| ||||||
Sbjct 377 CGGCGTCTGGTCACGCAGACCGCCCGGACAGGCTCCATCGGCGTCATGATGGCTCACAGT 318
Query 4813 AACTATGGCGCTGCGCTCAAAACTAACGGCGTTGAGGTCACGCTGATTTACAGCGGCGAT 4872
|| || || |||||||| | | | || || || ||||||||||||||||||||
Sbjct 317 AATTACGGTGCTGCGCTGGAGAAACAGGGTGTGGAAATCACGCTGATTTACAGCGGCAGC 258
Query 4873 CGCAAGGTCGACGGCAACCCTTACGAAAAGCTTCCGAAAGATGTGCGTGCTGATTTCCAG 4932
| ||||| || |||||||| ||| | |||||| | || || || | | |||
Sbjct 257 CATAAGGTGGATGGCAACCCCTACAGCCATCTTCCGGATGACGTCCGGGAGACACTGCAG 198
Query 4933 ACGCGTATCGATGCCACTCGTCAGATGTTTGCCGAAAAGGTTTCCGCTTATACCGGCATG 4992
| || || || || || || ||||||||||| | ||||| || || ||||||||| ||
Sbjct 197 TCCCGGATGGACGCAACCCGCCAGATGTTTGCGCAGAAGGTGTCGGCATATACCGGCCTG 138
Query 4993 TCTGTTCAGGACGTGCTGGACACCGAAGCGGCAGTATTCTCCGGCCAGGAATCTTTGGAT 5052
|| || |||| |||||||| ||||| || ||||| | | ||| ||||| | | |||
Sbjct 137 TCCGTGCAGGTTGTGCTGGATACCGAGGCTGCAGTGTACAGCGGTCAGGAGGCCATTGAT 78
Query 5053 AACGGGCTGGCGGATGAACTTGTTAACAATACCGATGCGCTCGGCGTGATGCGCGAAGCA 5112
||| ||||| |||||||||||||||| ||||||||| || ||| ||||| || |||
Sbjct 77 GCCGGACTGGCTGATGAACTTGTTAACAGCACCGATGCGATCACCGTCATGCGTGATGCA 18
Query 5113 CTCGA 5117
|| ||
Sbjct 17 CTGGA 13
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 145005573820160
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |