Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dirofilaria_20immitis_20[genbank_20GCA_5F001077395.1_202013-08-23] 25,560 sequences; 84,888,114 total letters Query= NC_019720.1 Length=44120 Score E Sequences producing significant alignments: (Bits) Value seq21498 129 2e-25 >seq21498 Length=399 Score = 129 bits (142), Expect = 2e-25 Identities = 158/216 (73%), Gaps = 0/216 (0%) Strand=Plus/Plus Query 11578 CTTCAGGCCCAGCTTAAAACGCTCGAGCAGCATATCAGCGTAAACGACGTTATCAGCAAA 11637 |||||||| | || ||||| ||| ||||| | | | ||| || |||||| | Sbjct 1 CTTCAGGCAGAACTCCGGACGCTGGAGAAGCATGCCGGAGCAAATGAGAAAATCAGCCAG 60 Query 11638 CAGCGTCAGGATCTCTGGCAGACTGAAAATCAGTTCACCGTTCTGCAGGAGGCCGCGGGG 11697 ||||| | |||| | ||| || | || | ||||||| | || ||| ||||||| ||| Sbjct 61 CAGCGCCGGGATTTGTGGAAGGCGGAGAGTCAGTTCGCGGTACTGGAGGAGGCGGCGCAA 120 Query 11698 CGTCGTCAGCTTACGGCGCAGGAAAAATCACTGCTGGCGCACAAGGAAGAAACGCTCGAG 11757 ||||| ||||| | || ||||| ||||| ||||||||||| || || || ||||| ||| Sbjct 121 CGTCGCCAGCTGTCTGCACAGGAGAAATCCCTGCTGGCGCATAAAGATGAGACGCTGGAG 180 Query 11758 TACAAGCGGCAGCTGGCCGACCTGGGAGATAAGGTT 11793 ||||| || |||||||| | || || || |||||| Sbjct 181 TACAAACGCCAGCTGGCTGCACTTGGCGACAAGGTT 216 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 141019584035040