Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dirofilaria_20immitis_20[genbank_20GCA_5F001077395.1_202013-08-23] 25,560 sequences; 84,888,114 total letters Query= NC_019723.1 Length=47090 Score E Sequences producing significant alignments: (Bits) Value seq20922 792 0.0 seq21498 720 0.0 seq24227 444 2e-120 seq24591 419 7e-113 seq22751 262 1e-65 >seq20922 Length=439 Score = 792 bits (878), Expect = 0.0 Identities = 439/439 (100%), Gaps = 0/439 (0%) Strand=Plus/Minus Query 4694 TATGGGCGCTTGCCAACGACATGAACTGCAGTGCAGGTCAGTTGCTTGCCAGTGCCGCCT 4753 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 439 TATGGGCGCTTGCCAACGACATGAACTGCAGTGCAGGTCAGTTGCTTGCCAGTGCCGCCT 380 Query 4754 CCCGGCGTCTGGTCACGCAGACCGCCCGGACAGGCTCCATCGGCGTCATGATGGCTCACA 4813 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 379 CCCGGCGTCTGGTCACGCAGACCGCCCGGACAGGCTCCATCGGCGTCATGATGGCTCACA 320 Query 4814 GTAATTACGGTGCTGCGCTGGAGAAACAGGGTGTGGAAATCACGCTGATTTACAGCGGCA 4873 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 319 GTAATTACGGTGCTGCGCTGGAGAAACAGGGTGTGGAAATCACGCTGATTTACAGCGGCA 260 Query 4874 GCCATAAGGTGGATGGCAACCCCTACAGCCATCTTCCGGATGACGTCCGGGAGACACTGC 4933 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 259 GCCATAAGGTGGATGGCAACCCCTACAGCCATCTTCCGGATGACGTCCGGGAGACACTGC 200 Query 4934 AGTCCCGGATGGACGCAACCCGCCAGATGTTTGCGCAGAAGGTGTCGGCATATACCGGCC 4993 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 199 AGTCCCGGATGGACGCAACCCGCCAGATGTTTGCGCAGAAGGTGTCGGCATATACCGGCC 140 Query 4994 TGTCCGTGCAGGTTGTGCTGGATACCGAGGCTGCAGTGTACAGCGGTCAGGAGGCCATTG 5053 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 139 TGTCCGTGCAGGTTGTGCTGGATACCGAGGCTGCAGTGTACAGCGGTCAGGAGGCCATTG 80 Query 5054 ATGCCGGACTGGCTGATGAACTTGTTAACAGCACCGATGCGATCACCGTCATGCGTGATG 5113 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 79 ATGCCGGACTGGCTGATGAACTTGTTAACAGCACCGATGCGATCACCGTCATGCGTGATG 20 Query 5114 CACTGGATGCACGTAAATC 5132 ||||||||||||||||||| Sbjct 19 CACTGGATGCACGTAAATC 1 >seq21498 Length=399 Score = 720 bits (798), Expect = 0.0 Identities = 399/399 (100%), Gaps = 0/399 (0%) Strand=Plus/Plus Query 11783 CTTCAGGCAGAACTCCGGACGCTGGAGAAGCATGCCGGAGCAAATGAGAAAATCAGCCAG 11842 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1 CTTCAGGCAGAACTCCGGACGCTGGAGAAGCATGCCGGAGCAAATGAGAAAATCAGCCAG 60 Query 11843 CAGCGCCGGGATTTGTGGAAGGCGGAGAGTCAGTTCGCGGTACTGGAGGAGGCGGCGCAA 11902 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 61 CAGCGCCGGGATTTGTGGAAGGCGGAGAGTCAGTTCGCGGTACTGGAGGAGGCGGCGCAA 120 Query 11903 CGTCGCCAGCTGTCTGCACAGGAGAAATCCCTGCTGGCGCATAAAGATGAGACGCTGGAG 11962 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 121 CGTCGCCAGCTGTCTGCACAGGAGAAATCCCTGCTGGCGCATAAAGATGAGACGCTGGAG 180 Query 11963 TACAAACGCCAGCTGGCTGCACTTGGCGACAAGGTTACGTATCAGGAGCGCCTGAACGCG 12022 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 181 TACAAACGCCAGCTGGCTGCACTTGGCGACAAGGTTACGTATCAGGAGCGCCTGAACGCG 240 Query 12023 CTGGCGCAGCAGGCGGATAAATTCGCACAGCAGCAACGGGCAAAACGGGCCGCCATTGAT 12082 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 241 CTGGCGCAGCAGGCGGATAAATTCGCACAGCAGCAACGGGCAAAACGGGCCGCCATTGAT 300 Query 12083 GCGAAAAGCCGGGGGCTGACTGACCGGCAGGCAGAACGGGAAGCCACGGAACAGCGCCTG 12142 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 301 GCGAAAAGCCGGGGGCTGACTGACCGGCAGGCAGAACGGGAAGCCACGGAACAGCGCCTG 360 Query 12143 AAGGAACAGTATGGCGATAATCCGCTGGCGCTGAATAAC 12181 ||||||||||||||||||||||||||||||||||||||| Sbjct 361 AAGGAACAGTATGGCGATAATCCGCTGGCGCTGAATAAC 399 >seq24227 Length=246 Score = 444 bits (492), Expect = 2e-120 Identities = 246/246 (100%), Gaps = 0/246 (0%) Strand=Plus/Minus Query 16236 CTGCGACCAGTCAGTGCCGGACGGCTTTGGCGGCACGGAGCCGCGCATCACCTGTAATGC 16295 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 246 CTGCGACCAGTCAGTGCCGGACGGCTTTGGCGGCACGGAGCCGCGCATCACCTGTAATGC 187 Query 16296 GTACCTGACCACACAGCGTAAGGCGTGGGATGTGCTCAGCGATTTCTGCTCGGCGATGCG 16355 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 186 GTACCTGACCACACAGCGTAAGGCGTGGGATGTGCTCAGCGATTTCTGCTCGGCGATGCG 127 Query 16356 CTGTATGCCGGTATGGAACGGGCAGACGCTGACGTTCGTGCAGGACCGACCGTCGGATAA 16415 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 126 CTGTATGCCGGTATGGAACGGGCAGACGCTGACGTTCGTGCAGGACCGACCGTCGGATAA 67 Query 16416 GACGTGGACCTATAACCGCAGTAATGTGGTGATGCCGGATGATGGCGCGCCGTTCCGCTA 16475 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 66 GACGTGGACCTATAACCGCAGTAATGTGGTGATGCCGGATGATGGCGCGCCGTTCCGCTA 7 Query 16476 CAGCTT 16481 |||||| Sbjct 6 CAGCTT 1 >seq24591 Length=232 Score = 419 bits (464), Expect = 7e-113 Identities = 232/232 (100%), Gaps = 0/232 (0%) Strand=Plus/Minus Query 17095 GAAAAAGAGGCCATCGTGGATAACGGGGCGCACTTTGACGGCGAACAGAGTGGCACGGTG 17154 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 232 GAAAAAGAGGCCATCGTGGATAACGGGGCGCACTTTGACGGCGAACAGAGTGGCACGGTG 173 Query 17155 AATGGTGTCACGCCGCCAGCGGTGCAGCACCTGACCGCAGAAGTCACTGCAGACAGCGGG 17214 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 172 AATGGTGTCACGCCGCCAGCGGTGCAGCACCTGACCGCAGAAGTCACTGCAGACAGCGGG 113 Query 17215 GAATATCAGGTGCTGGCGCGATGGGACACACCGAAGGTGGTGAAGGGCGTGAGTTTCCTG 17274 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 112 GAATATCAGGTGCTGGCGCGATGGGACACACCGAAGGTGGTGAAGGGCGTGAGTTTCCTG 53 Query 17275 CTCCGTCTGACCGTAACAGCGGACGACGGCAGTGAGCGGCTGGTCAGCACGG 17326 |||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 52 CTCCGTCTGACCGTAACAGCGGACGACGGCAGTGAGCGGCTGGTCAGCACGG 1 >seq22751 Length=317 Score = 262 bits (290), Expect = 1e-65 Identities = 147/148 (99%), Gaps = 0/148 (0%) Strand=Plus/Plus Query 31432 GGGAGGTAAACGGGCATTTCAGTTCAAGGCCGTTGCCGTCACTGCATAAACCATCGGGAG 31491 |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct 141 GGGAGGTAAACGGGTATTTCAGTTCAAGGCCGTTGCCGTCACTGCATAAACCATCGGGAG 200 Query 31492 AGCAGGCGGTACGCATACTTTCGTCGCGATAGATGATCGGGGATTCAGTAACATTCACGC 31551 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 201 AGCAGGCGGTACGCATACTTTCGTCGCGATAGATGATCGGGGATTCAGTAACATTCACGC 260 Query 31552 CGGAAGTGAATTCAAACAGGGTTCTGGC 31579 |||||||||||||||||||||||||||| Sbjct 261 CGGAAGTGAATTCAAACAGGGTTCTGGC 288 Score = 188 bits (208), Expect = 2e-43 Identities = 110/114 (96%), Gaps = 0/114 (0%) Strand=Plus/Minus Query 1321 CTCCAGCGTGTTTTATCTCTGCGAGCATAATGCCTGCGTCATCCGCCAGCAGGAGCTGGA 1380 |||||||| ||||| | |||||||||||||||||||||||||||||||||||||||||| Sbjct 132 CTCCAGCGCTTTTTAACACTGCGAGCATAATGCCTGCGTCATCCGCCAGCAGGAGCTGGA 73 Query 1381 CTTTACTGATGCCCGTTATATCTGCGAAAAGACCGGGATCTGGACCCGTGATGG 1434 |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 72 CTTTACTGATGCCCGTTATATCTGCGAAAAGACCGGGATCTGGACCCGTGATGG 19 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 150520699333440