Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Dirofilaria_20immitis_20[genbank_20GCA_5F001077395.1_202013-08-23]
25,560 sequences; 84,888,114 total letters
Query= NC_019723.1
Length=47090
Score E
Sequences producing significant alignments: (Bits) Value
seq20922 792 0.0
seq21498 720 0.0
seq24227 444 2e-120
seq24591 419 7e-113
seq22751 262 1e-65
>seq20922
Length=439
Score = 792 bits (878), Expect = 0.0
Identities = 439/439 (100%), Gaps = 0/439 (0%)
Strand=Plus/Minus
Query 4694 TATGGGCGCTTGCCAACGACATGAACTGCAGTGCAGGTCAGTTGCTTGCCAGTGCCGCCT 4753
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 439 TATGGGCGCTTGCCAACGACATGAACTGCAGTGCAGGTCAGTTGCTTGCCAGTGCCGCCT 380
Query 4754 CCCGGCGTCTGGTCACGCAGACCGCCCGGACAGGCTCCATCGGCGTCATGATGGCTCACA 4813
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 379 CCCGGCGTCTGGTCACGCAGACCGCCCGGACAGGCTCCATCGGCGTCATGATGGCTCACA 320
Query 4814 GTAATTACGGTGCTGCGCTGGAGAAACAGGGTGTGGAAATCACGCTGATTTACAGCGGCA 4873
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 319 GTAATTACGGTGCTGCGCTGGAGAAACAGGGTGTGGAAATCACGCTGATTTACAGCGGCA 260
Query 4874 GCCATAAGGTGGATGGCAACCCCTACAGCCATCTTCCGGATGACGTCCGGGAGACACTGC 4933
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 259 GCCATAAGGTGGATGGCAACCCCTACAGCCATCTTCCGGATGACGTCCGGGAGACACTGC 200
Query 4934 AGTCCCGGATGGACGCAACCCGCCAGATGTTTGCGCAGAAGGTGTCGGCATATACCGGCC 4993
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 199 AGTCCCGGATGGACGCAACCCGCCAGATGTTTGCGCAGAAGGTGTCGGCATATACCGGCC 140
Query 4994 TGTCCGTGCAGGTTGTGCTGGATACCGAGGCTGCAGTGTACAGCGGTCAGGAGGCCATTG 5053
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 139 TGTCCGTGCAGGTTGTGCTGGATACCGAGGCTGCAGTGTACAGCGGTCAGGAGGCCATTG 80
Query 5054 ATGCCGGACTGGCTGATGAACTTGTTAACAGCACCGATGCGATCACCGTCATGCGTGATG 5113
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 79 ATGCCGGACTGGCTGATGAACTTGTTAACAGCACCGATGCGATCACCGTCATGCGTGATG 20
Query 5114 CACTGGATGCACGTAAATC 5132
|||||||||||||||||||
Sbjct 19 CACTGGATGCACGTAAATC 1
>seq21498
Length=399
Score = 720 bits (798), Expect = 0.0
Identities = 399/399 (100%), Gaps = 0/399 (0%)
Strand=Plus/Plus
Query 11783 CTTCAGGCAGAACTCCGGACGCTGGAGAAGCATGCCGGAGCAAATGAGAAAATCAGCCAG 11842
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1 CTTCAGGCAGAACTCCGGACGCTGGAGAAGCATGCCGGAGCAAATGAGAAAATCAGCCAG 60
Query 11843 CAGCGCCGGGATTTGTGGAAGGCGGAGAGTCAGTTCGCGGTACTGGAGGAGGCGGCGCAA 11902
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 61 CAGCGCCGGGATTTGTGGAAGGCGGAGAGTCAGTTCGCGGTACTGGAGGAGGCGGCGCAA 120
Query 11903 CGTCGCCAGCTGTCTGCACAGGAGAAATCCCTGCTGGCGCATAAAGATGAGACGCTGGAG 11962
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 121 CGTCGCCAGCTGTCTGCACAGGAGAAATCCCTGCTGGCGCATAAAGATGAGACGCTGGAG 180
Query 11963 TACAAACGCCAGCTGGCTGCACTTGGCGACAAGGTTACGTATCAGGAGCGCCTGAACGCG 12022
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 181 TACAAACGCCAGCTGGCTGCACTTGGCGACAAGGTTACGTATCAGGAGCGCCTGAACGCG 240
Query 12023 CTGGCGCAGCAGGCGGATAAATTCGCACAGCAGCAACGGGCAAAACGGGCCGCCATTGAT 12082
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 241 CTGGCGCAGCAGGCGGATAAATTCGCACAGCAGCAACGGGCAAAACGGGCCGCCATTGAT 300
Query 12083 GCGAAAAGCCGGGGGCTGACTGACCGGCAGGCAGAACGGGAAGCCACGGAACAGCGCCTG 12142
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 301 GCGAAAAGCCGGGGGCTGACTGACCGGCAGGCAGAACGGGAAGCCACGGAACAGCGCCTG 360
Query 12143 AAGGAACAGTATGGCGATAATCCGCTGGCGCTGAATAAC 12181
|||||||||||||||||||||||||||||||||||||||
Sbjct 361 AAGGAACAGTATGGCGATAATCCGCTGGCGCTGAATAAC 399
>seq24227
Length=246
Score = 444 bits (492), Expect = 2e-120
Identities = 246/246 (100%), Gaps = 0/246 (0%)
Strand=Plus/Minus
Query 16236 CTGCGACCAGTCAGTGCCGGACGGCTTTGGCGGCACGGAGCCGCGCATCACCTGTAATGC 16295
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 246 CTGCGACCAGTCAGTGCCGGACGGCTTTGGCGGCACGGAGCCGCGCATCACCTGTAATGC 187
Query 16296 GTACCTGACCACACAGCGTAAGGCGTGGGATGTGCTCAGCGATTTCTGCTCGGCGATGCG 16355
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 186 GTACCTGACCACACAGCGTAAGGCGTGGGATGTGCTCAGCGATTTCTGCTCGGCGATGCG 127
Query 16356 CTGTATGCCGGTATGGAACGGGCAGACGCTGACGTTCGTGCAGGACCGACCGTCGGATAA 16415
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 126 CTGTATGCCGGTATGGAACGGGCAGACGCTGACGTTCGTGCAGGACCGACCGTCGGATAA 67
Query 16416 GACGTGGACCTATAACCGCAGTAATGTGGTGATGCCGGATGATGGCGCGCCGTTCCGCTA 16475
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 66 GACGTGGACCTATAACCGCAGTAATGTGGTGATGCCGGATGATGGCGCGCCGTTCCGCTA 7
Query 16476 CAGCTT 16481
||||||
Sbjct 6 CAGCTT 1
>seq24591
Length=232
Score = 419 bits (464), Expect = 7e-113
Identities = 232/232 (100%), Gaps = 0/232 (0%)
Strand=Plus/Minus
Query 17095 GAAAAAGAGGCCATCGTGGATAACGGGGCGCACTTTGACGGCGAACAGAGTGGCACGGTG 17154
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 232 GAAAAAGAGGCCATCGTGGATAACGGGGCGCACTTTGACGGCGAACAGAGTGGCACGGTG 173
Query 17155 AATGGTGTCACGCCGCCAGCGGTGCAGCACCTGACCGCAGAAGTCACTGCAGACAGCGGG 17214
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 172 AATGGTGTCACGCCGCCAGCGGTGCAGCACCTGACCGCAGAAGTCACTGCAGACAGCGGG 113
Query 17215 GAATATCAGGTGCTGGCGCGATGGGACACACCGAAGGTGGTGAAGGGCGTGAGTTTCCTG 17274
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 112 GAATATCAGGTGCTGGCGCGATGGGACACACCGAAGGTGGTGAAGGGCGTGAGTTTCCTG 53
Query 17275 CTCCGTCTGACCGTAACAGCGGACGACGGCAGTGAGCGGCTGGTCAGCACGG 17326
||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 52 CTCCGTCTGACCGTAACAGCGGACGACGGCAGTGAGCGGCTGGTCAGCACGG 1
>seq22751
Length=317
Score = 262 bits (290), Expect = 1e-65
Identities = 147/148 (99%), Gaps = 0/148 (0%)
Strand=Plus/Plus
Query 31432 GGGAGGTAAACGGGCATTTCAGTTCAAGGCCGTTGCCGTCACTGCATAAACCATCGGGAG 31491
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct 141 GGGAGGTAAACGGGTATTTCAGTTCAAGGCCGTTGCCGTCACTGCATAAACCATCGGGAG 200
Query 31492 AGCAGGCGGTACGCATACTTTCGTCGCGATAGATGATCGGGGATTCAGTAACATTCACGC 31551
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 201 AGCAGGCGGTACGCATACTTTCGTCGCGATAGATGATCGGGGATTCAGTAACATTCACGC 260
Query 31552 CGGAAGTGAATTCAAACAGGGTTCTGGC 31579
||||||||||||||||||||||||||||
Sbjct 261 CGGAAGTGAATTCAAACAGGGTTCTGGC 288
Score = 188 bits (208), Expect = 2e-43
Identities = 110/114 (96%), Gaps = 0/114 (0%)
Strand=Plus/Minus
Query 1321 CTCCAGCGTGTTTTATCTCTGCGAGCATAATGCCTGCGTCATCCGCCAGCAGGAGCTGGA 1380
|||||||| ||||| | ||||||||||||||||||||||||||||||||||||||||||
Sbjct 132 CTCCAGCGCTTTTTAACACTGCGAGCATAATGCCTGCGTCATCCGCCAGCAGGAGCTGGA 73
Query 1381 CTTTACTGATGCCCGTTATATCTGCGAAAAGACCGGGATCTGGACCCGTGATGG 1434
||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 72 CTTTACTGATGCCCGTTATATCTGCGAAAAGACCGGGATCTGGACCCGTGATGG 19
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 150520699333440
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |