Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Dirofilaria_20immitis_20[genbank_20GCA_5F001077395.1_202013-08-23]
25,560 sequences; 84,888,114 total letters
Query= NC_020864.1
Length=205622
Score E
Sequences producing significant alignments: (Bits) Value
seq156 154 2e-32
seq616 152 7e-32
seq3028 143 4e-29
seq10840 141 1e-28
seq1448 118 1e-21
>seq156
Length=140780
Score = 154 bits (170), Expect = 2e-32
Identities = 187/252 (74%), Gaps = 2/252 (1%)
Strand=Plus/Plus
Query 195599 GTTGAATTTCACGGTGAGAAGAAACAATTTGCTCCCGAAGAAATTTCGTCTATGGTGTTG 195658
||||||| | || || | |||| || | || ||||||||||| || ||||| |||
Sbjct 84549 GTTGAATACAAGGGCGAAACGAAAACCTTCACACCAGAAGAAATTTCATCGATGGTTTTG 84608
Query 195659 ATTAAGATGAAGGAGACTGCGGAATCTTTCATGGGTAAAACTGTGAAAGATGCAGTTGTG 195718
||||||||||||| || || ||| | || | ||| | | || |||||||| || |
Sbjct 84609 GTTAAGATGAAGGAAACAGCTGAAGCATTTCTCGGTCATGCGGTCAAAGATGCTGTAATC 84668
Query 195719 ACTGTACCTGCTTACTTCAGTGATTCACAACGACAGGCGACAAAGGACGCTGCTGCTATT 195778
|| || || || || || | || |||||||||||||| || || || ||| ||| |||
Sbjct 84669 ACAGTCCCCGCATATTTTAACGACTCACAACGACAGGCAACGAAAGATTCTGGTGCAATT 84728
Query 195779 GCGGGTCTAAACTGT-CTTAGAATTATCAATGAACCAACAGCGGCTGCAATTGCTTATGG 195837
|| ||| | || ||| || | |||||||| |||||||| || ||||| |||||||||||
Sbjct 84729 GCTGGTTTGAA-TGTCCTGCGTATTATCAACGAACCAACTGCAGCTGCTATTGCTTATGG 84787
Query 195838 TCTGGACAAGAA 195849
| ||||||| ||
Sbjct 84788 TTTGGACAAAAA 84799
Score = 132 bits (146), Expect = 6e-26
Identities = 183/256 (71%), Gaps = 0/256 (0%)
Strand=Plus/Plus
Query 196133 GAGATTGATTCGTTGTTTGACGGAATTGACTTCTATACAACTATTACCCGTGCACGTTTT 196192
|| |||||||||||||| || ||||||||||| ||||| | ||||| ||||| ||||||
Sbjct 85392 GAAATTGATTCGTTGTTCGAGGGAATTGACTTTTATACCAACATTACGCGTGCTCGTTTT 85451
Query 196193 GAAGAGTTAAACTCTGATTTGTTTAGGAAGTGTATGGAACCTGTTGAACAAGTACTTCGT 196252
||||| | ||||| | || | ||||| || ||||| ||| ||| ||
Sbjct 85452 GAAGAACTTTGTGCTGATCTCTTCCGTTCAACCATGGATCCGGTTGAGAAAGCACTGCGA 85511
Query 196253 GACGCAAAGATGGATAAGTCTAAGGTTGATGAAATTGTCCTTGTGGGAGGATCAACCCGT 196312
||||| ||||||||||| | | || |||| ||||| | || || ||||| ||||||
Sbjct 85512 GACGCTAAGATGGATAAAGCCCAAGTGCATGATATTGTATTAGTAGGTGGATCGACCCGT 85571
Query 196313 ATTCCGAAGATTCAACAGATGCTTTCTAGCTTCTTCAATAATAAAGATTTAAACAAAACG 196372
||||| || | ||| || ||||||| ||||| | ||||| | || ||||
Sbjct 85572 ATTCCAAAAGTGCAAAAGCTGCTTTCAGATTTCTTTTCTGGCAAAGAACTCAATAAAAGC 85631
Query 196373 ATCAACCCGGATGAAG 196388
||||| || |||||||
Sbjct 85632 ATCAATCCAGATGAAG 85647
Score = 118 bits (130), Expect = 1e-21
Identities = 190/268 (71%), Gaps = 4/268 (1%)
Strand=Plus/Plus
Query 196610 GTATATGAAGGAGAACGCTCCCGTG-CAAAGGATAACCATCTACTTGGAACTTTCGATTT 196668
|| || ||||| ||||| | | || ||||||| || || | ||||||| ||||| ||
Sbjct 86102 GTTTACGAAGGTGAACG-TGCTATGACAAAGGACAATAATTTGCTTGGAAAATTCGAATT 86160
Query 196669 GACGGGGATTCCAGCTGCACCCAGAGGTGTTCCACAGATTAATGTTTGCTTCGATATAGA 196728
| || |||||| |||| || | || || || || ||| | ||| |||||||| ||
Sbjct 86161 ATCTGGAATTCCACCTGCTCCTCGTGGCGTGCCGCAAATTGAAGTTACTTTCGATATTGA 86220
Query 196729 CGCAAATGGAATTCTAAACGTCACAGCTGAGGACAAGGCTTCTGGCAAATCTGAA-AAGA 196787
|| || || ||||| || || | ||| | ||||| | | || ||| | ||| ||||
Sbjct 86221 TGCGAACGGTATTCTGAATGTTTCCGCTCAAGACAAATCGACAGG-AAAGCAGAATAAGA 86279
Query 196788 TTGTGATTACCAATGACAAGGGGCGGCTTTCTAAGGAGGAAATTGAACGTATGGTTCAAG 196847
|| ||||||||||| ||||| || | || ||||| || ||||| || ||||| || |
Sbjct 86280 TTACTATTACCAATGATAAGGGACGTTTGTCAAAGGATGAGATTGAGCGAATGGTGCAGG 86339
Query 196848 ATGCGGAAAAGTACAGGGAAGAAGACGA 196875
| || ||||| || | || ||| || ||
Sbjct 86340 AAGCTGAAAAATATAAGGCAGATGATGA 86367
Score = 98.7 bits (108), Expect = 1e-15
Identities = 156/224 (70%), Gaps = 0/224 (0%)
Strand=Plus/Plus
Query 196388 GCAGTTGCTTATGGTGCGGCCGTTCAGGCTGCTATTCTCTCAGGTGTTGACAATAATAAC 196447
|| || || |||||||| || || ||||| |||||||| || |||| | | |
Sbjct 85789 GCCGTGGCATATGGTGCAGCAGTACAGGCAGCTATTCTTTCTGGTGATAAGTCGGAAGCT 85848
Query 196448 GTCCAAGATCTTCTGCTACTTGATGTTGCACCCGTATCCCTGGGTCTTGAAACAGCGGGT 196507
||||| ||| | | ||||| || || ||||| | || || ||| |||||||||| ||
Sbjct 85849 GTCCAGGATTTATTACTACTCGACGTCGCACCACTTTCACTTGGTATTGAAACAGCTGGA 85908
Query 196508 GGTGTTATGACTAAAATTATTGATAGGAACACAACTATTCCGACTAAGAAGGAACAAGTC 196567
|||||||||||| |||| | |||| || ||||| ||||| || | ||
Sbjct 85909 GGTGTTATGACTGCTCTTATCAAGCGGAATACTACTATCCCGACGAAAACATCTCAGACA 85968
Query 196568 TTTTCAACGTATTCCGATAATCAACCAGGTGTTCATATTCAAGT 196611
||| | || || || || |||||||| ||||||| ||||| ||
Sbjct 85969 TTTACCACATACTCTGACAATCAACCTGGTGTTCTCATTCAGGT 86012
Score = 86.0 bits (94), Expect = 8e-12
Identities = 83/107 (78%), Gaps = 0/107 (0%)
Strand=Plus/Plus
Query 195382 AGGAAACCGTACAACTCCATCGTACGTTGCCTTTACAGATAATGAACGTCTCGTTGGAGA 195441
||| || || ||||| || || || || || ||||| |||| ||||||||| |||| ||
Sbjct 84106 AGGTAATCGAACAACACCGTCATATGTGGCGTTTACCGATACTGAACGTCTTATTGGTGA 84165
Query 195442 TGCCGCAAAAAATCAGACAGCTATGAACCCTATCAATACTGTCTTTG 195488
||| |||||||||||| || ||||| || ||||||||| ||||
Sbjct 84166 TGCGGCAAAAAATCAGGTTGCAATGAATCCACACAATACTGTTTTTG 84212
>seq616
Length=68005
Score = 152 bits (168), Expect = 7e-32
Identities = 175/234 (75%), Gaps = 1/234 (0%)
Strand=Plus/Plus
Query 195616 GAAGAAACAATTTGCTCCCGAAGAAATTTCGTCTATGGTGTTGATTAAGATGAAGGAGAC 195675
||| |||| || ||||| || |||||||| | ||||| | ||| |||||||| |
Sbjct 31480 GAAAAAACC-TTCGCTCCTGAGGAAATTTCAGCAATGGTTCTCGGTAAAATGAAGGAAAT 31538
Query 195676 TGCGGAATCTTTCATGGGTAAAACTGTGAAAGATGCAGTTGTGACTGTACCTGCTTACTT 195735
||| ||| | | | |||| ||| || ||| |||||||||| || || || ||||||||
Sbjct 31539 TGCAGAAGCATACTTGGGAAAAGAAGTAAAACATGCAGTTGTTACAGTGCCCGCTTACTT 31598
Query 195736 CAGTGATTCACAACGACAGGCGACAAAGGACGCTGCTGCTATTGCGGGTCTAAACTGTCT 195795
| |||| |||||||||| || || || || || | | ||||||| ||||| || | |
Sbjct 31599 TAATGATGCACAACGACAAGCTACCAAAGATGCAGGTACTATTGCCGGTCTCAATGTTGT 31658
Query 195796 TAGAATTATCAATGAACCAACAGCGGCTGCAATTGCTTATGGTCTGGACAAGAA 195849
| | || ||||||||||| ||||| ||||| || |||||||| ||||| || ||
Sbjct 31659 TCGTATCATCAATGAACCTACAGCTGCTGCTATCGCTTATGGGCTGGATAAAAA 31712
>seq3028
Length=62347
Score = 143 bits (158), Expect = 4e-29
Identities = 117/142 (82%), Gaps = 0/142 (0%)
Strand=Plus/Minus
Query 171862 ATGCAAATCTTTGTGAAAACCCTTACTGGAAAAACTATCACCCTCGAGGTTGAGTCGTCA 171921
|||||||| ||||||||||| | || || ||||| |||||| | |||||||| | ||
Sbjct 28969 ATGCAAATTTTTGTGAAAACATTGACGGGCAAAACAATCACCTTAGAGGTTGAAGCCTCT 28910
Query 171922 GACACAATCGATAACATCAAAGCCAAGATTCAAGATAAGGAAGGCATTCCACCCGATCAG 171981
|| |||||||| || | |||||||| |||||||| |||||||| || ||||| ||||||
Sbjct 28909 GATACAATCGAAAATGTGAAAGCCAAAATTCAAGACAAGGAAGGAATCCCACCAGATCAG 28850
Query 171982 CAACGACTTATTTTTGCTGGTA 172003
||||| |||||||| |||||||
Sbjct 28849 CAACGTCTTATTTTCGCTGGTA 28828
Score = 123 bits (136), Expect = 3e-23
Identities = 116/148 (78%), Gaps = 0/148 (0%)
Strand=Plus/Minus
Query 171857 GTAGTATGCAAATCTTTGTGAAAACCCTTACTGGAAAAACTATCACCCTCGAGGTTGAGT 171916
|| |||||||||| ||||||||||| ||||| || || || ||||| | || || ||
Sbjct 29374 GTGGTATGCAAATTTTTGTGAAAACTCTTACCGGTAAGACAATCACATTGGAAGTGGAAG 29315
Query 171917 CGTCAGACACAATCGATAACATCAAAGCCAAGATTCAAGATAAGGAAGGCATTCCACCCG 171976
| || ||||| ||||| || | ||||| || || || || || |||||||||||||| |
Sbjct 29314 CATCTGACACCATCGAGAATGTTAAAGCGAAAATCCAGGACAAAGAAGGCATTCCACCAG 29255
Query 171977 ATCAGCAACGACTTATTTTTGCTGGTAA 172004
|||||||||| | ||||| ||||||||
Sbjct 29254 ATCAGCAACGGTTGATTTTCGCTGGTAA 29227
Score = 122 bits (134), Expect = 1e-22
Identities = 112/142 (79%), Gaps = 0/142 (0%)
Strand=Plus/Minus
Query 171862 ATGCAAATCTTTGTGAAAACCCTTACTGGAAAAACTATCACCCTCGAGGTTGAGTCGTCA 171921
||||||||||| || ||||| | || |||||||| || || || || || || | |||
Sbjct 29744 ATGCAAATCTTCGTAAAAACATTGACGGGAAAAACAATTACGCTAGAAGTGGAAGCTTCA 29685
Query 171922 GACACAATCGATAACATCAAAGCCAAGATTCAAGATAAGGAAGGCATTCCACCCGATCAG 171981
||||| || || || | ||||| ||||| ||||| |||||||| |||||||| |||||
Sbjct 29684 GACACGATTGAGAATGTTAAAGCAAAGATACAAGACAAGGAAGGTATTCCACCGGATCAA 29625
Query 171982 CAACGACTTATTTTTGCTGGTA 172003
|| || || |||||||||||||
Sbjct 29624 CAGCGCCTGATTTTTGCTGGTA 29603
Score = 116 bits (128), Expect = 5e-21
Identities = 111/142 (78%), Gaps = 0/142 (0%)
Strand=Plus/Minus
Query 171862 ATGCAAATCTTTGTGAAAACCCTTACTGGAAAAACTATCACCCTCGAGGTTGAGTCGTCA 171921
||||| || || || || || |||||||| ||||| || || || || || || | |||
Sbjct 28659 ATGCAGATTTTCGTCAAGACACTTACTGGCAAAACCATAACACTGGAAGTAGAAGCCTCA 28600
Query 171922 GACACAATCGATAACATCAAAGCCAAGATTCAAGATAAGGAAGGCATTCCACCCGATCAG 171981
|| || ||||| || | || ||||| |||||||| ||||| ||||| || || ||||||
Sbjct 28599 GATACTATCGAGAATGTAAAGGCCAAAATTCAAGACAAGGAGGGCATCCCTCCTGATCAG 28540
Query 171982 CAACGACTTATTTTTGCTGGTA 172003
||||| ||||||||||| ||||
Sbjct 28539 CAACGCCTTATTTTTGCAGGTA 28518
>seq10840
Length=643
Score = 141 bits (156), Expect = 1e-28
Identities = 117/143 (82%), Gaps = 0/143 (0%)
Strand=Plus/Plus
Query 171862 ATGCAAATCTTTGTGAAAACCCTTACTGGAAAAACTATCACCCTCGAGGTTGAGTCGTCA 171921
|||||||| || |||||||| || ||||| ||||| || || || ||||| || |||||
Sbjct 1 ATGCAAATATTCGTGAAAACACTAACTGGTAAAACGATTACTCTTGAGGTAGAATCGTCT 60
Query 171922 GACACAATCGATAACATCAAAGCCAAGATTCAAGATAAGGAAGGCATTCCACCCGATCAG 171981
|| || || || || | ||||| || |||||||||||||| ||||||||||| |||||
Sbjct 61 GATACCATTGAGAATGTGAAAGCTAAAATTCAAGATAAGGAGGGCATTCCACCTGATCAA 120
Query 171982 CAACGACTTATTTTTGCTGGTAA 172004
|||||||||||||| || |||||
Sbjct 121 CAACGACTTATTTTCGCAGGTAA 143
>seq1448
Length=39285
Score = 118 bits (130), Expect = 1e-21
Identities = 112/143 (78%), Gaps = 0/143 (0%)
Strand=Plus/Plus
Query 171861 TATGCAAATCTTTGTGAAAACCCTTACTGGAAAAACTATCACCCTCGAGGTTGAGTCGTC 171920
||||||||| ||||| ||||| | ||||| || || || || || || || || || ||
Sbjct 34732 TATGCAAATTTTTGTAAAAACATTAACTGGTAAGACGATTACGCTTGAAGTCGAATCCTC 34791
Query 171921 AGACACAATCGATAACATCAAAGCCAAGATTCAAGATAAGGAAGGCATTCCACCCGATCA 171980
|| || || || || | ||||| |||||||| |||||||||||||| || || |||||
Sbjct 34792 GGATACTATTGAAAATGTAAAAGCGAAGATTCAGGATAAGGAAGGCATACCTCCAGATCA 34851
Query 171981 GCAACGACTTATTTTTGCTGGTA 172003
||||||| | |||||||| ||||
Sbjct 34852 GCAACGATTGATTTTTGCAGGTA 34874
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 657652212963200
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