Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Dirofilaria_20immitis_20[genbank_20GCA_5F001077395.1_202013-08-23]
25,560 sequences; 84,888,114 total letters
Query= NC_021923.1
Length=140633
Score E
Sequences producing significant alignments: (Bits) Value
seq3028 140 3e-28
>seq3028
Length=62347
Score = 140 bits (154), Expect = 3e-28
Identities = 159/211 (75%), Gaps = 2/211 (1%)
Strand=Plus/Minus
Query 24703 GATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCAC 24762
|||||| || || | ||||| | || |||||||| || ||| | ||||| ||||| |
Sbjct 28317 GATGCAAATTTTCGTGAAAACTTTGACGGGTAAAACCATAACGTTGGAAGTGGAAGCATC 28258
Query 24763 CGACACAGTAGA-AACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATC 24821
|| || | || || | |||| ||||| ||||||||||| || || || || || || |
Sbjct 28257 GGATACGATCGAGAATGTTAAAGCAAAA-ATCCAAGACAAGGAGGGTATTCCACCAGACC 28199
Query 24822 AACAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATA 24881
|||| || |||||||||||||||| || ||||||||| | | | || |||||||
Sbjct 28198 AACAGCGACTGATCTTTGCCGGGAAGCAACTGGAGGATGGTCGTACGTTATCGGATTATA 28139
Query 24882 ACATTCAAAAGGAATCGACACTACACTTGGT 24912
| ||||| ||||||||||| || ||||||||
Sbjct 28138 ATATTCAGAAGGAATCGACGCTTCACTTGGT 28108
Score = 91.5 bits (100), Expect = 1e-13
Identities = 108/144 (75%), Gaps = 2/144 (1%)
Strand=Plus/Minus
Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763
||||| || ||| | ||||| || |||||||| || || || | ||||| ||||| |
Sbjct 29369 ATGCAAATTTTTGTGAAAACTCTTACCGGTAAGACAATCACATTGGAAGTGGAAGCATCT 29310
Query 24764 GACACAGTAGA-AACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCA 24822
||||| | || || | |||| | ||| ||||| ||||||||||| || || || |||||
Sbjct 29309 GACACCATCGAGAATGTTAAAGCGAAA-ATCCAGGACAAAGAAGGCATTCCACCAGATCA 29251
Query 24823 ACAACGTTTGATCTTTGCCGGGAA 24846
||||| ||||| || || || ||
Sbjct 29250 GCAACGGTTGATTTTCGCTGGTAA 29227
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 449753857716800
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |