Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dirofilaria_20immitis_20[genbank_20GCA_5F001077395.1_202013-08-23] 25,560 sequences; 84,888,114 total letters Query= NC_022098.1 Length=2473870 Score E Sequences producing significant alignments: (Bits) Value seq4005 109 9e-18 >seq4005 Length=26775 Score = 109 bits (120), Expect = 9e-18 Identities = 164/233 (70%), Gaps = 0/233 (0%) Strand=Plus/Minus Query 1485472 TACTTGGTGACGGCCTTGGTACCCTCTGAGACGGCGTGCCTGGCCAGTTCGCCGCGCATG 1485531 ||||| ||||| || || || || || || || || ||| | |||| |||||| | | | Sbjct 18896 TACTTCGTGACCGCTTTTGTTCCTTCCGAAACAGCATGCTTAGCCAATTCGCCAGGAAGG 18837 Query 1485532 ATCAGGCGCACGGCGGTCTGGATCTCGCGGGTGCCGATCGTGTTGCGCTTGTTAGTGCGC 1485591 || || || || || |||||||| || || | | || || || |||||| | || Sbjct 18836 ATAAGCCGTACAGCCGTCTGGATTTCCCGAGAGGAAATGGTCGAACGTTTGTTATAGTGC 18777 Query 1485592 GCCAGGCGGCCGGCCTCGGTGCCGATGCGGTCGATCATGTCGTTGACAAACGAGTTCATG 1485651 || || || | || || | | || || |||| || |||||| || || || |||||| Sbjct 18776 GCTAGTCGACTTGCTTCCGCAGCAATACGCTCGAACACGTCGTTCACGAAGGAATTCATG 18717 Query 1485652 ATCGACATCGATTTGTTGGAGATGCCCACGTCGGGGTGCACCTGCTTGAGCAC 1485704 |||||||| | ||| ||||||||| |||||| ||||| ||||| || || Sbjct 18716 ATCGACATAGCTTTCGACGAGATGCCCGTGTCGGGATGCACTTGCTTCAGGAC 18664 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 7913527466220840