Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Dirofilaria_20immitis_20[genbank_20GCA_5F001077395.1_202013-08-23]
25,560 sequences; 84,888,114 total letters
Query= NC_023681.1
Length=152710
Score E
Sequences producing significant alignments: (Bits) Value
seq1448 100 3e-16
seq3028 87.8 2e-12
>seq1448
Length=39285
Score = 100 bits (110), Expect = 3e-16
Identities = 108/143 (76%), Gaps = 0/143 (0%)
Strand=Plus/Minus
Query 137270 TACCAGCATAGATCAGACGTTGCTGATCGGGAGGTATGCCTTCTTTGTCGGTAATTTTTT 137329
|||| ||| | |||| ||||||||||| |||||||||||||| || || ||| ||
Sbjct 34874 TACCTGCAAAAATCAATCGTTGCTGATCTGGAGGTATGCCTTCCTTATCCTGAATCTTCG 34815
Query 137330 GTTTTAGCTGTTCCACCGTGTCTGTGGGTTCTACTTCAACAGTCACCGTCTTGCCGGTCA 137389
||||| | ||| | || || | || ||| ||||||| || | |||||| || || |
Sbjct 34814 CTTTTACATTTTCAATAGTATCCGAGGATTCGACTTCAAGCGTAATCGTCTTACCAGTTA 34755
Query 137390 ATGTTTTTACGAATATTTGCATA 137412
|||||||||| || |||||||||
Sbjct 34754 ATGTTTTTACAAAAATTTGCATA 34732
>seq3028
Length=62347
Score = 87.8 bits (96), Expect = 2e-12
Identities = 108/144 (75%), Gaps = 4/144 (3%)
Strand=Plus/Plus
Query 137270 TACCAGCATAGATCAGACGTTGCTGATCGGGAGGTATGCCTTCTTTGTCG-GTAATTTTT 137328
|||||||| | ||||| || || ||||| || || || ||||| ||||| ||| | ||
Sbjct 29603 TACCAGCAAAAATCAGGCGCTGTTGATCCGGTGGAATACCTTCCTTGTCTTGTA--TCTT 29660
Query 137329 TGTTTTAGCTGT-TCCACCGTGTCTGTGGGTTCTACTTCAACAGTCACCGTCTTGCCGGT 137387
|| |||| | | || | |||||||| | ||| ||||| | || | || || || ||
Sbjct 29661 TGCTTTAACATTCTCAATCGTGTCTGAAGCTTCCACTTCTAGCGTAATTGTTTTTCCCGT 29720
Query 137388 CAATGTTTTTACGAATATTTGCAT 137411
||||||||||||||| ||||||||
Sbjct 29721 CAATGTTTTTACGAAGATTTGCAT 29744
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 488387910192000
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |