Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Dirofilaria_20immitis_20[genbank_20GCA_5F001077395.1_202013-08-23]
25,560 sequences; 84,888,114 total letters
Query= NC_025257.1
Length=102759
Score E
Sequences producing significant alignments: (Bits) Value
seq3028 84.2 1e-11
seq1448 84.2 1e-11
>seq3028
Length=62347
Score = 84.2 bits (92), Expect = 1e-11
Identities = 107/145 (74%), Gaps = 2/145 (1%)
Strand=Plus/Plus
Query 33607 TTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGGCACACCTTCTTTGTCGGCAATTTTC 33666
|| || || |||||||| || ||||||||| | || | ||||||||||| ||||||
Sbjct 29227 TTACCAGCGAAAATCAACCGTTGCTGATCTGGTGGAATGCCTTCTTTGTCCTGGATTTTC 29286
Query 33667 TGTTTCAACATAGTC-ACGGTGTCGCTTGATTCCACGTCAACCGTGATCGTTTTACCTGT 33725
| || ||||| || | |||||| || |||||| || | ||||| || ||||| ||
Sbjct 29287 -GCTTTAACATTCTCGATGGTGTCAGATGCTTCCACTTCCAATGTGATTGTCTTACCGGT 29345
Query 33726 TAACGTTTTTACAAAGATCTGCATA 33750
| ||||| ||||| || ||||||
Sbjct 29346 AAGAGTTTTCACAAAAATTTGCATA 29370
>seq1448
Length=39285
Score = 84.2 bits (92), Expect = 1e-11
Identities = 107/145 (74%), Gaps = 2/145 (1%)
Strand=Plus/Minus
Query 33610 CCGGCAAAAATCAAACGCTGCTGATCTTGCGGCACACCTTCTTTGTCGGCAATTTTCTGT 33669
|| ||||||||||| || ||||||||| | || | ||||| || || ||| ||| |
Sbjct 34872 CCTGCAAAAATCAATCGTTGCTGATCTGGAGGTATGCCTTCCTTATCCTGAATCTTCGCT 34813
Query 33670 TTCAACATAGTCACG-GTGTCGCTTGATTCCACGTCAACCGTGATCGTTTTACCTGTTAA 33728
|| | ||| ||| || || ||||| || |||| ||| ||||| ||||| |||||
Sbjct 34812 TTTA-CATTTTCAATAGTATCCGAGGATTCGACTTCAAGCGTAATCGTCTTACCAGTTAA 34754
Query 33729 CGTTTTTACAAAGATCTGCATAGTT 33753
||||||||||| || |||||| ||
Sbjct 34753 TGTTTTTACAAAAATTTGCATATTT 34729
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 328601604595200
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |