Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dirofilaria_20immitis_20[genbank_20GCA_5F001077395.1_202013-08-23] 25,560 sequences; 84,888,114 total letters Query= NC_026511.1 Length=140913 Score E Sequences producing significant alignments: (Bits) Value seq3028 116 3e-21 >seq3028 Length=62347 Score = 116 bits (128), Expect = 3e-21 Identities = 164/228 (72%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 35510 CCACCACGTAACCTCAACACCAAATGTAACGTACTCTCCTTTTGAATGTTGTAATCGGCC 35569 |||||||| | | | ||||| || | ||| ||||| ||||| || ||||| | Sbjct 28090 CCACCACGAAGACGAAGAACCAAGTGAAGCGTCGATTCCTTCTGAATATTATAATCCGAT 28149 Query 35570 AAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAAGGA 35629 || || || | || ||||| ||||| || ||||| |||| ||||| ||||| | ||| Sbjct 28150 AACGTACGACCATCCTCCAGTTGCTTCCCGGCAAAGATCAGTCGCTGTTGGTCTGGTGGA 28209 Query 35630 ACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGTTGCC-ACCGTGTCGCTCGATTCCAC 35688 | | ||||||||| ||| |||||||| | || | | ||| || | |||||| Sbjct 28210 ATACCCTCCTTGTCTTGGAT-TTTTGCTTTAACATTCTCGATCGTATCCGATGCTTCCAC 28268 Query 35689 CTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCACAAATATCTGCAT 35736 |||| ||| || ||||||||||||||||||||||| || || ||||| Sbjct 28269 TTCCAACGTTATGGTTTTACCCGTCAAAGTTTTCACGAAAATTTGCAT 28316 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 450649571444800