Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dirofilaria_20immitis_20[genbank_20GCA_5F001077395.1_202013-08-23] 25,560 sequences; 84,888,114 total letters Query= NC_027339.1 Length=38389 Score E Sequences producing significant alignments: (Bits) Value seq25371 318 1e-82 seq22751 253 5e-63 >seq25371 Length=205 Score = 318 bits (352), Expect = 1e-82 Identities = 191/201 (95%), Gaps = 0/201 (0%) Strand=Plus/Plus Query 32354 GCTTTCCGGGAAAACGGGATCACCACAATGGAACAGGTTAACGCTGGAATGCGCGTAGCC 32413 ||||| |||||||||||||||||||| ||||||||||||||||| ||||||||||||||| Sbjct 5 GCTTTTCGGGAAAACGGGATCACCACGATGGAACAGGTTAACGCAGGAATGCGCGTAGCC 64 Query 32414 CGTCGGCAGAATCGACCATTCCTGCCATCACCCGGGCAGTTTGTCGCCTGGTGCCGGGAA 32473 |||||||||||||||||||| ||||||||||||||||||||||| || |||||||||||| Sbjct 65 CGTCGGCAGAATCGACCATTTCTGCCATCACCCGGGCAGTTTGTTGCATGGTGCCGGGAA 124 Query 32474 GAAGCATCTGTTAACGCCGGGCTGCCAAACGTCAGCGAGCTGGTTGATATGGTTTACGAG 32533 |||||||| |||| |||||| ||||||||||||||||||||||||||||||||||||||| Sbjct 125 GAAGCATCCGTTACCGCCGGACTGCCAAACGTCAGCGAGCTGGTTGATATGGTTTACGAG 184 Query 32534 TATTGCCGGAAGCGTGGCCTG 32554 |||||||||||||| |||||| Sbjct 185 TATTGCCGGAAGCGAGGCCTG 205 >seq22751 Length=317 Score = 253 bits (280), Expect = 5e-63 Identities = 145/148 (98%), Gaps = 0/148 (0%) Strand=Plus/Plus Query 24695 GGGAGGTAAACGGGCATTTCAGTTCAAGGCCGTTGCCGTCACTGCATAAACCATCGGGAG 24754 |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct 141 GGGAGGTAAACGGGTATTTCAGTTCAAGGCCGTTGCCGTCACTGCATAAACCATCGGGAG 200 Query 24755 AGCAGGCGGTGCGCATATTTTCGTCGCGATAGATGATCGGGGATTCAGTAACATTCACGC 24814 |||||||||| |||||| |||||||||||||||||||||||||||||||||||||||||| Sbjct 201 AGCAGGCGGTACGCATACTTTCGTCGCGATAGATGATCGGGGATTCAGTAACATTCACGC 260 Query 24815 CGGAAGTGAATTCAAACAGGGTTCTGGC 24842 |||||||||||||||||||||||||||| Sbjct 261 CGGAAGTGAATTCAAACAGGGTTCTGGC 288 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 122685950440720