Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Dirofilaria_20immitis_20[genbank_20GCA_5F001077395.1_202013-08-23]
25,560 sequences; 84,888,114 total letters
Query= NC_028112.1
Length=178262
Score E
Sequences producing significant alignments: (Bits) Value
seq3028 140 4e-28
seq10840 114 1e-20
>seq3028
Length=62347
Score = 140 bits (154), Expect = 4e-28
Identities = 167/227 (74%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465
|||||||| || || || || | || || || || || || | || || || ||
Sbjct 28316 ATGCAAATTTTCGTGAAAACTTTGACGGGTAAAACCATAACGTTGGAAGTGGAAGCATCG 28257
Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525
|||| || | ||| | || || ||||| || ||||||||||| ||||| ||||||||
Sbjct 28256 GATACGATCGAGAATGTTAAAGCAAAAATCCAAGACAAGGAGGGTATTCCACCAGACCAA 28197
Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585
||||| || || ||||| || |||||||| ||||||| |||||| || | || ||||||
Sbjct 28196 CAGCGACTGATCTTTGCCGGGAAGCAACTGGAGGATGGTCGTACGTTATCGGATTATAAT 28137
Query 27586 GTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632
| || |||||||| || ||||| | || | |||||||| |||||
Sbjct 28136 ATTCAGAAGGAATCGACGCTTCACTTGGTTCTTCGTCTTCGTGGTGG 28090
Score = 98.7 bits (108), Expect = 1e-15
Identities = 107/142 (75%), Gaps = 0/142 (0%)
Strand=Plus/Minus
Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465
||||| || || |||||||| ||||| ||||| || || || || || || || |
Sbjct 28659 ATGCAGATTTTCGTCAAGACACTTACTGGCAAAACCATAACACTGGAAGTAGAAGCCTCA 28600
Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525
|||| || | ||| | ||||| |||||||| ||||||||||| || ||||| || |||
Sbjct 28599 GATACTATCGAGAATGTAAAGGCCAAAATTCAAGACAAGGAGGGCATCCCTCCTGATCAG 28540
Query 27526 CAGCGTCTAATTTTTGCTGGTA 27547
|| || || |||||||| ||||
Sbjct 28539 CAACGCCTTATTTTTGCAGGTA 28518
>seq10840
Length=643
Score = 114 bits (126), Expect = 1e-20
Identities = 111/143 (78%), Gaps = 0/143 (0%)
Strand=Plus/Plus
Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465
|||||||| || || || || || || || || || |||||||||||||| || || |
Sbjct 1 ATGCAAATATTCGTGAAAACACTAACTGGTAAAACGATTACTCTTGAGGTAGAATCGTCT 60
Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525
|||| ||||| ||| |||| ||||||||||| || |||||||| ||||| || || ||
Sbjct 61 GATACCATTGAGAATGTGAAAGCTAAAATTCAAGATAAGGAGGGCATTCCACCTGATCAA 120
Query 27526 CAGCGTCTAATTTTTGCTGGTAA 27548
|| || || ||||| || |||||
Sbjct 121 CAACGACTTATTTTCGCAGGTAA 143
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 570128185827200
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |