Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dirofilaria_20immitis_20[genbank_20GCA_5F001077395.1_202013-08-23] 25,560 sequences; 84,888,114 total letters Query= NC_028699.1 Length=40740 Score E Sequences producing significant alignments: (Bits) Value seq25371 114 3e-21 seq22751 95.1 3e-15 >seq25371 Length=205 Score = 114 bits (126), Expect = 3e-21 Identities = 146/200 (73%), Gaps = 6/200 (3%) Strand=Plus/Plus Query 31599 GCTTTCCGTGAGAACGACATCACCACCATGGAGCAAGTTGCGGCCGGAATGCGTGTCGCC 31658 ||||| || || |||| |||||||| ||||| || ||| || |||||||| || ||| Sbjct 5 GCTTTTCGGGAAAACGGGATCACCACGATGGAACAGGTTAACGCAGGAATGCGCGTAGCC 64 Query 31659 CGCCGTCAGGAACGTCCGTTTCTTCCGTCTCCAGGCCAGTTTGTCGCATGGTGTAAGGCT 31718 || || ||| | || || ||||| || || || || |||||||| |||||||| || Sbjct 65 CGTCGGCAGAATCGACCATTTCTGCCATCACCCGGGCAGTTTGTTGCATGGTGCCGGGAA 124 Query 31719 GAATTGGCAACTGCT---GCCGGGCTTCCTGATGCCAATGAACTGGTCGATATGGTTTAC 31775 ||| ||| | | | ||||| || || | | || || ||||| |||||||||||| Sbjct 125 GAA---GCATCCGTTACCGCCGGACTGCCAAACGTCAGCGAGCTGGTTGATATGGTTTAC 181 Query 31776 CAGTATTGCCGCACGCGTGG 31795 |||||||||| | ||| || Sbjct 182 GAGTATTGCCGGAAGCGAGG 201 >seq22751 Length=317 Score = 95.1 bits (104), Expect = 3e-15 Identities = 105/140 (75%), Gaps = 0/140 (0%) Strand=Plus/Plus Query 26275 GAGGTGAAAGGGCACTTCAACTCAAGACCGCGGCCATCACTGCACAGGCCGTCAGGAGAA 26334 ||||| || ||| | |||| ||||| ||| ||| |||||||| | || || ||||| Sbjct 143 GAGGTAAACGGGTATTTCAGTTCAAGGCCGTTGCCGTCACTGCATAAACCATCGGGAGAG 202 Query 26335 CAGGCGGTACGCATGCCCTCGTCACGGAAAAGGATCGGCGACCCGGTGACCTTCACGTCA 26394 |||||||||||||| | ||||| || | | |||||| || | || || |||||| | Sbjct 203 CAGGCGGTACGCATACTTTCGTCGCGATAGATGATCGGGGATTCAGTAACATTCACGCCG 262 Query 26395 GTGGTGAACTCAAACAGGGT 26414 | ||||| ||||||||||| Sbjct 263 GAAGTGAATTCAAACAGGGT 282 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 130206866961440