Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dirofilaria_20immitis_20[genbank_20GCA_5F001077395.1_202013-08-23] 25,560 sequences; 84,888,114 total letters Query= NC_031033.1 Length=217124 Score E Sequences producing significant alignments: (Bits) Value seq1362 91.5 2e-13 seq1462 84.2 3e-11 >seq1362 Length=15600 Score = 91.5 bits (100), Expect = 2e-13 Identities = 77/95 (81%), Gaps = 0/95 (0%) Strand=Plus/Minus Query 47850 TTTTGATATTCACCCACACGTTTCTCGAAAAAATTAGTTTTGCCTTCCAATGATATATTT 47909 || || || |||| |||||||| ||||||||||||||||| ||||| | |||||| Sbjct 4218 TTCTGGTACTCACTGACACGTTTTTCGAAAAAATTAGTTTTCCCTTCAATCGATATACGC 4159 Query 47910 TCCATAAAATCAAATGGATTAACTGCATTATAAAT 47944 |||||||||||||||||||||| | || ||| || Sbjct 4158 TCCATAAAATCAAATGGATTAAGCGAATAATAGAT 4124 >seq1462 Length=36103 Score = 84.2 bits (92), Expect = 3e-11 Identities = 97/131 (74%), Gaps = 0/131 (0%) Strand=Plus/Plus Query 77490 AGAATAAAGGCATCTGCTAATCCCTGAACTCCAATACCAATAGGTCTATGTCTCTTATTG 77549 || || || ||||| |||| |||||||| ||||| ||||| || | |||||| ||||| Sbjct 14551 AGGATGAAAGCATCAGCTAGGCCCTGAACACCAATGCCAATTGGACGATGTCTTTTATTA 14610 Query 77550 GAAATTTTAGCTTCTGGAATAGGATAATAATTAATGTCTATAATTTTATTGAGATTTCTA 77609 || || ||||| || | ||||||||||| || |||| |||||| | ||| || Sbjct 14611 GATCGTTCCGCTTCCGGTACTGGATAATAATTGCGATCAATAACTTTATTCAAATTCTTA 14670 Query 77610 ACAACTACTTT 77620 || ||||| || Sbjct 14671 ACCACTACCTT 14681 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 694446853318400