Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Dirofilaria_20immitis_20[genbank_20GCA_5F001077395.1_202013-08-23]
25,560 sequences; 84,888,114 total letters
Query= NC_031033.1
Length=217124
Score E
Sequences producing significant alignments: (Bits) Value
seq1362 91.5 2e-13
seq1462 84.2 3e-11
>seq1362
Length=15600
Score = 91.5 bits (100), Expect = 2e-13
Identities = 77/95 (81%), Gaps = 0/95 (0%)
Strand=Plus/Minus
Query 47850 TTTTGATATTCACCCACACGTTTCTCGAAAAAATTAGTTTTGCCTTCCAATGATATATTT 47909
|| || || |||| |||||||| ||||||||||||||||| ||||| | ||||||
Sbjct 4218 TTCTGGTACTCACTGACACGTTTTTCGAAAAAATTAGTTTTCCCTTCAATCGATATACGC 4159
Query 47910 TCCATAAAATCAAATGGATTAACTGCATTATAAAT 47944
|||||||||||||||||||||| | || ||| ||
Sbjct 4158 TCCATAAAATCAAATGGATTAAGCGAATAATAGAT 4124
>seq1462
Length=36103
Score = 84.2 bits (92), Expect = 3e-11
Identities = 97/131 (74%), Gaps = 0/131 (0%)
Strand=Plus/Plus
Query 77490 AGAATAAAGGCATCTGCTAATCCCTGAACTCCAATACCAATAGGTCTATGTCTCTTATTG 77549
|| || || ||||| |||| |||||||| ||||| ||||| || | |||||| |||||
Sbjct 14551 AGGATGAAAGCATCAGCTAGGCCCTGAACACCAATGCCAATTGGACGATGTCTTTTATTA 14610
Query 77550 GAAATTTTAGCTTCTGGAATAGGATAATAATTAATGTCTATAATTTTATTGAGATTTCTA 77609
|| || ||||| || | ||||||||||| || |||| |||||| | ||| ||
Sbjct 14611 GATCGTTCCGCTTCCGGTACTGGATAATAATTGCGATCAATAACTTTATTCAAATTCTTA 14670
Query 77610 ACAACTACTTT 77620
|| ||||| ||
Sbjct 14671 ACCACTACCTT 14681
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 694446853318400
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |