Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Dirofilaria_20immitis_20[genbank_20GCA_5F001077395.1_202013-08-23]
25,560 sequences; 84,888,114 total letters
Query= NC_032255.1
Length=112536
Score E
Sequences producing significant alignments: (Bits) Value
seq3028 102 6e-17
seq1448 82.4 5e-11
>seq3028
Length=62347
Score = 102 bits (112), Expect = 6e-17
Identities = 150/210 (71%), Gaps = 2/210 (1%)
Strand=Plus/Plus
Query 44129 ACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTCC 44188
|||| ||||||||| ||||| || || || ||||| | | || | || |||
Sbjct 28108 ACCAAGTGAAGCGTCGATTCCTTCTGAATATTATAATCCGATAACGTACGACCATCCTCC 28167
Query 44189 AGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGTT 44248
|| ||||||||||||||||||| ||||| || |||| || | ||| ||||| ||
Sbjct 28168 AGTTGCTTCCCGGCAAAGATCAGTCGCTGTTGGTCTGGTGGAATACCCTCCTTGTCTTGG 28227
Query 44249 ATCTTCTGCTTCAATGTTC-CTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCTT 44307
|| || ||||| || ||| | || || || | | |||||| |||| ||| || || ||
Sbjct 28228 AT-TTTTGCTTTAACATTCTCGATCGTATCCGATGCTTCCACTTCCAACGTTATGGTTTT 28286
Query 44308 TCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337
||||| | || |||||||| ||||||||
Sbjct 28287 ACCCGTCAAAGTTTTCACGAAAATTTGCAT 28316
Score = 91.5 bits (100), Expect = 1e-13
Identities = 107/142 (75%), Gaps = 2/142 (1%)
Strand=Plus/Plus
Query 44198 CCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGTTATCTTCTGC 44257
|| ||||| |||| ||||| ||||| | || | ||||||||| || |||||| |||
Sbjct 29605 CCAGCAAAAATCAGGCGCTGTTGATCCGGTGGAATACCTTCCTTGTCTTGTATCTT-TGC 29663
Query 44258 TTCAATGTTC-CTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCTTTCCCGTGAG 44316
|| || ||| | || ||||| | | |||||| || | |||||| || |||||||| |
Sbjct 29664 TTTAACATTCTCAATCGTGTCTGAAGCTTCCACTTCTAGCGTAATTGTTTTTCCCGTCAA 29723
Query 44317 GGTCTTCACGAAGATTTGCATG 44338
|| || |||||||||||||||
Sbjct 29724 TGTTTTTACGAAGATTTGCATG 29745
>seq1448
Length=39285
Score = 82.4 bits (90), Expect = 5e-11
Identities = 102/140 (73%), Gaps = 0/140 (0%)
Strand=Plus/Minus
Query 44198 CCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGTTATCTTCTGC 44257
|| ||||| ||||| || |||||||||| ||| | |||||||| ||| ||||||
Sbjct 34872 CCTGCAAAAATCAATCGTTGCTGATCTGGAGGTATGCCTTCCTTATCCTGAATCTTCGCT 34813
Query 44258 TTCAATGTTCCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCTTTCCCGTGAGG 44317
|| | || | || || || | |||||| || || | |||||||||||| || || |
Sbjct 34812 TTTACATTTTCAATAGTATCCGAGGATTCGACTTCAAGCGTAATCGTCTTACCAGTTAAT 34753
Query 44318 GTCTTCACGAAGATTTGCAT 44337
|| || || || ||||||||
Sbjct 34752 GTTTTTACAAAAATTTGCAT 34733
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 359878258490520
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |