Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ditylenchus_20destructor_20[genbank_20GCA_5F001579705.1_202016-03- 03] 1,761 sequences; 111,138,200 total letters Query= NC_014649.1 Length=1181549 Score E Sequences producing significant alignments: (Bits) Value seq1097 129 4e-24 >seq1097 Length=645754 Score = 129 bits (142), Expect = 4e-24 Identities = 206/291 (71%), Gaps = 5/291 (2%) Strand=Plus/Plus Query 518022 GATTATCAAAATCTTCACCTCCCAATTTAGTATTTCCTGACGTAGCTCTTACTTGGAAAA 518081 ||||||| |||||||| |||||||| | |||| || | ||||| | | |||| || | Sbjct 374081 GATTATCGAAATCTTCGCCTCCCAAATGGGTATCACCAGCCGTAGATTTCACTTCAAAGA 374140 Query 518082 GTCCATCTTCAA-GA--GACAAAAGAGTTACATCATGGGTTCCACCACCCATATCAAAAA 518138 | ||||| || || | || | ||||| ||| ||||| || | |||||| | Sbjct 374141 GCTGGCCTTCACTGATGGAAAGAATCGAGACATCGAAGGTACCACCGCCAAGATCAAAGA 374200 Query 518139 TAAGTACATTCATTTCTTTGTCTTGGTTT-TTATCAAGACCATACGCAAAAGCAGCAGCA 518197 | | || ||| || ||| | || || || | |||||| || ||||| |||||| Sbjct 374201 TCAAAACGTTCTGATCACC-TCTAAGCTTCTTGTCCAAACCATAAGCCAAAGCGGCAGCA 374259 Query 518198 GTTGGTTCATTAATAATTCTCAAAACATTAAGACCAGCAATTCTTCCTGCATCTTTAGTG 518257 || ||||| || || |||| | ||||| ||||| || || |||||| ||||||||| Sbjct 374260 GTGGGTTCGTTGATGATTCGGAGCACATTCAGACCGGCGATAGCTCCTGCGTCTTTAGTG 374319 Query 518258 GCTTGTCTTTGTGAATCGTTAAAATATGCAGGAACAGTAATAACGGCATCA 518308 |||||||| || |||||||| || || || || || ||||| || || ||| Sbjct 374320 GCTTGTCTCTGAGAATCGTTGAAGTAAGCCGGGACTGTAATTACTGCGTCA 374370 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 3780735013379266