Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ditylenchus_20destructor_20[genbank_20GCA_5F001579705.1_202016-03- 03] 1,761 sequences; 111,138,200 total letters Query= NC_014767.1 Length=184095 Score E Sequences producing significant alignments: (Bits) Value seq1074 82.4 9e-11 >seq1074 Length=682288 Score = 82.4 bits (90), Expect = 9e-11 Identities = 111/152 (73%), Gaps = 2/152 (1%) Strand=Plus/Plus Query 109441 TTCCATGCGTACATATGCATTGAAGAG-AGTTTGGAAAGTGTCGGACTCTCCATAAACAA 109499 |||||||||| | |||||||||| | | |||| | | | | || | | || ||| Sbjct 174241 TTCCATGCGTGAAAATGCATTGAACTGCATTTTGCATAATTTGGGGCAG-CGATGTGCAA 174299 Query 109500 GTTCATCGACTGAGACTGATCGATGAATCGACCACGATCAGCCGCCATGTCGATGATACA 109559 || | ||| || || ||||| ||||| ||||||||| || ||||| |||| |||| Sbjct 174300 ATTGAGCGATTGGGATTGATCAATGAACGCACCACGATCCGCGGCCATTTCGAGGATATG 174359 Query 109560 CTTTTGGCTAATTTCCCAGACAGTCTTGTACA 109591 ||| || ||||||||||||||| ||||||| Sbjct 174360 CTTCTGCGGAATTTCCCAGACAGTTTTGTACA 174391 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 588963035165800