Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ditylenchus_20destructor_20[genbank_20GCA_5F001579705.1_202016-03- 03] 1,761 sequences; 111,138,200 total letters Query= NC_015960.1 Length=175699 Score E Sequences producing significant alignments: (Bits) Value seq1 91.5 2e-13 >seq1 Length=3556246 Score = 91.5 bits (100), Expect = 2e-13 Identities = 149/215 (69%), Gaps = 0/215 (0%) Strand=Plus/Plus Query 19345 ACCAAATTTTCATTAACTATTCCATCACTAGCTGCAAAAAATGCTAATACATGTTTAATA 19404 |||| ||||||||| || || ||||| || ||||| || || || ||| || ||||| Sbjct 2737083 ACCAGATTTTCATTCACAATCCCATCGGAGGCAGCAAAGAAGGCCAAAACACGTGTAATA 2737142 Query 19405 AAATGTTTTTCATCTGAGGTTAATGTATTCCAATCATTAATATCTTTAGATAAATCTACT 19464 || | ||| |||| | | |||||| ||||| || | | ||| ||| Sbjct 2737143 AAGAATCGTTCCGGGTCCGTTAGTCCACGCCAATCGGCCATATCCTTTGCGAGATCAACT 2737202 Query 19465 TCTTCAACTGTCCAAAAAGAAGCCTCTGCTTTTTTATACATGTTCCATATATCACGATAT 19524 |||||||| ||||| || || ||| | || ||||| | |||||| |||||| ||| Sbjct 2737203 TCTTCAACAGTCCAGAATGACGCCACAGCGCGCTTATAGAAGTTCCAAATATCAAAGTAT 2737262 Query 19525 TGTATAGGAAATATAACAAATCTATTTTTATTTTC 19559 ||||| ||||| || ||||| | ||| |||||| Sbjct 2737263 TGTATCGGAAAAATCACAAAGCGATTCGGATTTTC 2737297 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 562096426580040