Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ditylenchus_20destructor_20[genbank_20GCA_5F001579705.1_202016-03- 03] 1,761 sequences; 111,138,200 total letters Query= NC_021858.1 Length=1908524 Score E Sequences producing significant alignments: (Bits) Value seq907 109 7e-18 seq557 86.0 8e-11 >seq907 Length=79662 Score = 109 bits (120), Expect = 7e-18 Identities = 123/165 (75%), Gaps = 0/165 (0%) Strand=Plus/Plus Query 1254365 GATCAGGCGCACGGCGGTCTGGATCTCGCGCGTGCCGATCGTGTTGCGCTTGTTCGAGTG 1254424 ||| || || |||| ||||||||| ||||| | || || |||||||| |||| Sbjct 47518 GATGAGTCGAACGGAGGTCTGGATTTCGCGAGACGAAATGGTCGATCGCTTGTTGTAGTG 47577 Query 1254425 CGCCAGACGGCCGGCCTCGGTGCCGATGCGGTCGATCATGTCGTTGACAAACGAGTTCAT 1254484 ||| || ||| |||||||| ||| ||| |||| | ||||||||| ||||||||||| Sbjct 47578 CGCGAGTCGGGAGGCCTCGGCAGCGAGGCGCTCGAAGACGTCGTTGACGAACGAGTTCAT 47637 Query 1254485 GACCGACATCGACTTGTTGGAGATGCCCACGTCGGGGTGCACCTG 1254529 || ||||| | |||| ||||| || ||||||||||||||| Sbjct 47638 GATGGACATGGCCTTGGACGAGATACCGGTGTCGGGGTGCACCTG 47682 >seq557 Length=1357928 Score = 86.0 bits (94), Expect = 8e-11 Identities = 118/165 (72%), Gaps = 0/165 (0%) Strand=Plus/Plus Query 1254365 GATCAGGCGCACGGCGGTCTGGATCTCGCGCGTGCCGATCGTGTTGCGCTTGTTCGAGTG 1254424 ||| || || |||| ||||||||| ||||| | |||||| |||||||| | || Sbjct 252290 GATGAGTCGGACGGAGGTCTGGATTTCGCGAGACGAAATCGTGGATCGCTTGTTGTATTG 252349 Query 1254425 CGCCAGACGGCCGGCCTCGGTGCCGATGCGGTCGATCATGTCGTTGACAAACGAGTTCAT 1254484 ||||| || ||||||| | ||||| |||| | |||||| || ||||||||||| Sbjct 252350 CGCCAATCGAGAAGCCTCGGCAGCAATGCGCTCGAAGACGTCGTTCACGAACGAGTTCAT 252409 Query 1254485 GACCGACATCGACTTGTTGGAGATGCCCACGTCGGGGTGCACCTG 1254529 || ||||| | || |||| || ||||||||||||||| Sbjct 252410 GATGGACATGGCTTTCGACGAGACACCGGTGTCGGGGTGCACCTG 252454 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 6106994684093237