Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ditylenchus_20destructor_20[genbank_20GCA_5F001579705.1_202016-03- 03] 1,761 sequences; 111,138,200 total letters Query= NC_022098.1 Length=2473870 Score E Sequences producing significant alignments: (Bits) Value seq907 102 1e-15 seq557 86.0 1e-10 >seq907 Length=79662 Score = 102 bits (112), Expect = 1e-15 Identities = 124/167 (74%), Gaps = 4/167 (2%) Strand=Plus/Plus Query 1485531 GATCAGGCGCACGGCGGTCTGGATCTCGCGGGTGCCGATCGTGTTGCGCTTGTT--AGTG 1485588 ||| || || |||| ||||||||| ||||| | || || |||||||| |||| Sbjct 47518 GATGAGTCGAACGGAGGTCTGGATTTCGCGAGACGAAATGGTCGATCGCTTGTTGTAGTG 47577 Query 1485589 CGCGCCAGGCGGCCGGCCTCGGTGCCGATGCGGTCGATCATGTCGTTGACAAACGAGTTC 1485648 |||| || ||| |||||||| ||| ||| |||| | ||||||||| ||||||||| Sbjct 47578 CGCG--AGTCGGGAGGCCTCGGCAGCGAGGCGCTCGAAGACGTCGTTGACGAACGAGTTC 47635 Query 1485649 ATGATCGACATCGATTTGTTGGAGATGCCCACGTCGGGGTGCACCTG 1485695 ||||| ||||| | ||| ||||| || ||||||||||||||| Sbjct 47636 ATGATGGACATGGCCTTGGACGAGATACCGGTGTCGGGGTGCACCTG 47682 >seq557 Length=1357928 Score = 86.0 bits (94), Expect = 1e-10 Identities = 118/165 (72%), Gaps = 0/165 (0%) Strand=Plus/Plus Query 1485531 GATCAGGCGCACGGCGGTCTGGATCTCGCGGGTGCCGATCGTGTTGCGCTTGTTAGTGCG 1485590 ||| || || |||| ||||||||| ||||| | |||||| |||||||| | Sbjct 252290 GATGAGTCGGACGGAGGTCTGGATTTCGCGAGACGAAATCGTGGATCGCTTGTTGTATTG 252349 Query 1485591 CGCCAGGCGGCCGGCCTCGGTGCCGATGCGGTCGATCATGTCGTTGACAAACGAGTTCAT 1485650 ||||| || ||||||| | ||||| |||| | |||||| || ||||||||||| Sbjct 252350 CGCCAATCGAGAAGCCTCGGCAGCAATGCGCTCGAAGACGTCGTTCACGAACGAGTTCAT 252409 Query 1485651 GATCGACATCGATTTGTTGGAGATGCCCACGTCGGGGTGCACCTG 1485695 ||| ||||| | ||| |||| || ||||||||||||||| Sbjct 252410 GATGGACATGGCTTTCGACGAGACACCGGTGTCGGGGTGCACCTG 252454 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 7916059074398079