Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ditylenchus_20destructor_20[genbank_20GCA_5F001579705.1_202016-03- 03] 1,761 sequences; 111,138,200 total letters Query= NC_025257.1 Length=102759 Score E Sequences producing significant alignments: (Bits) Value seq875 93.3 3e-14 >seq875 Length=1085948 Score = 93.3 bits (102), Expect = 3e-14 Identities = 109/145 (75%), Gaps = 2/145 (1%) Strand=Plus/Plus Query 33606 TTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGGCACACCTTCTTTGTCGGCAATTTT 33665 ||| ||||||||||| | ||||||||||||| |||| | ||||| ||||| ||| || Sbjct 311567 TTTACCGGCAAAAATGAGACGCTGCTGATCTGGCGGGATGCCTTCCTTGTCTTGAATCTT 311626 Query 33666 CTGTTTCAACATAGTC-ACGGTGTCGCTTGATTCCACGTCAACCGTGATCGTTTTACCTG 33724 ||| |||| || | ||||||||| | || || || | ||||||||| || || | Sbjct 311627 AGCCTTC-ACATTATCAATGGTGTCGCTCGCCTCAACTTCGAGCGTGATCGTCTTCCCGG 311685 Query 33725 TTAACGTTTTTACAAAGATCTGCAT 33749 | || || || |||||||| ||||| Sbjct 311686 TCAATGTCTTCACAAAGATTTGCAT 311710 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 328696945293120