Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ditylenchus_20destructor_20[genbank_20GCA_5F001579705.1_202016-03- 03] 1,761 sequences; 111,138,200 total letters Query= NC_029997.1 Length=105667 Score E Sequences producing significant alignments: (Bits) Value seq875 87.8 1e-12 >seq875 Length=1085948 Score = 87.8 bits (96), Expect = 1e-12 Identities = 112/152 (74%), Gaps = 2/152 (1%) Strand=Plus/Minus Query 23604 ACTTAAAATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGA 23663 ||| |||||||| || || || || || | || || || |||||||| ||||||||||| Sbjct 311717 ACTCAAAATGCAAATCTTTGTGAAGACATTGACCGGGAAGACGATCACGCTCGAAGTTGA 311658 Query 23664 CTCCACGGACACTGTTGA-AATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGC 23722 | | ||||| |||| ||| | || | || | || ||||| ||||| | |||| Sbjct 311657 GGCGAGCGACACCATTGATAATGTGAAGGCTAAGA-TTCAAGACAAGGAAGGCATCCCGC 311599 Query 23723 CAGATCAACAGCGTTTAATATTTGCCGGCAAA 23754 ||||||| |||||| | || |||||||| ||| Sbjct 311598 CAGATCAGCAGCGTCTCATTTTTGCCGGTAAA 311567 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 338002345574588