Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ditylenchus_20destructor_20[genbank_20GCA_5F001579705.1_202016-03- 03] 1,761 sequences; 111,138,200 total letters Query= NC_031033.1 Length=217124 Score E Sequences producing significant alignments: (Bits) Value seq1074 127 3e-24 >seq1074 Length=682288 Score = 127 bits (140), Expect = 3e-24 Identities = 162/223 (73%), Gaps = 0/223 (0%) Strand=Plus/Plus Query 77914 TATATAGCCGTTCAAATTCATCTCCCCAAACATCATCCAATCCAGGGCATTCATTTGGGC 77973 |||| ||| ||| |||||||| ||||| || || || || ||||||||||| || |||| Sbjct 176046 TATAAAGCGTTTCGAATTCATCACCCCATACGTCGTCTAAACCAGGGCATTCGTTAGGGC 176105 Query 77974 ACATCAATGACCAGTCACCATCTTCCTTAACTCGTTTCATAAAGAGATCAGGTATCCATA 78033 |||||| |||||| | |||| | || || || ||||| || | |||||| ||||||| Sbjct 176106 ACATCAGTGACCATTTTTCATCGTTGTTGACACGCTTCATGAATAAATCAGGAATCCATA 176165 Query 78034 GAGCAATAAATAGATCTCGGGTTCTATGTTCTTCATTTCCTGTATTCTTTTTAAGATCGA 78093 || ||| | |||||||| | | ||||| || || ||| ||| || || | Sbjct 176166 AGGCGTAAAACAAATCTCGGGCACGTTCCTCTTCGGCACCGGTGTTCAATTTTAGCTCCA 176225 Query 78094 GAAACTCCATAATATCAGAATGCCATGGTTCTAGATATATTGC 78136 ||| ||||||||||| | ||||| ||||| | ||| || || Sbjct 176226 AAAATTCCATAATATCGGCGTGCCAAGGTTCCAAATAAATGGC 176268 Score = 89.7 bits (98), Expect = 7e-13 Identities = 143/205 (70%), Gaps = 3/205 (1%) Strand=Plus/Plus Query 77509 ATCCCTGAACTCCAATACCAATAGGTCTATGTCTCTTATTGGAAATTTTAGCTTCTGGAA 77568 || |||| || |||||||||||||| | ||| | || ||||| | || ||| || |||| Sbjct 175420 ATACCTGTACGCCAATACCAATAGGACGATGCCGTTTGTTGGACAGTTCAGCATCGGGAA 175479 Query 77569 TAGGATAATAATTAATGTCTATAATTTTATTGAGATTTCTAACAACTACTTTAACCACGT 77628 | ||||| || || | || || |||||||| | |||||| |||| || || Sbjct 175480 TTGGATAGTAGTTCACATCAATGATTTTATTCAAATTTCTCGTAACTGTCTTCGTGACAG 175539 Query 77629 CCTTTAGTTTAAGAAAATCAAATCTTCCAT---CTATAACAAACATGTTCAAAGCTATAG 77685 ||||||| ||||| || | | || || |||| || | ||||| || || | Sbjct 175540 ATAATAGTTTATCCCAATCATATGTACGATCCGCTTTAACGAATCTATTCAAGGCGATTG 175599 Query 77686 ATGCTAGATTACAAACTGCTACCTC 77710 | ||||||||||||||||| || || Sbjct 175600 AAGCTAGATTACAAACTGCAACTTC 175624 Score = 86.0 bits (94), Expect = 9e-12 Identities = 192/286 (67%), Gaps = 3/286 (1%) Strand=Plus/Plus Query 76849 TCCATCCGTAGAAATGCATGCTTGTCAGTTTGGAATAACTAGGATCGGCTATATGAATAT 76908 ||||| ||| |||||||| | ||| | |||| | || | || || || | || Sbjct 174242 TCCATGCGTGAAAATGCATTGAACTGCATTTTGCATAATTTGGGGCAGCGATGTGCAAAT 174301 Query 76909 TCATCGACTGACTTTGATCGATGAAAGCTCCTCTATCAGCCGCCATTTTTATAATGGTCT 76968 | | ||| || |||||| ||||| || || | ||| || ||||||| | || || Sbjct 174302 TGAGCGATTGGGATTGATCAATGAACGCACCACGATCCGCGGCCATTTCGAGGATATGCT 174361 Query 76969 TTTGAGGAATTTCCCAAATAGTTTTGAAAACTTGTTTGATATCATCTGGAA-GGTTTG-- 77025 | || ||||||||||| | ||||||| | | | | ||||| |||| || ||| Sbjct 174362 TCTGCGGAATTTCCCAGACAGTTTTGTACAGCTCTCGGATATGTCGCGGAATGGATTGCA 174421 Query 77026 TATTTTGAATGGAACCACCATCTGATATAATTGTATTCTTTATATCATCATTCCACAATT 77085 |||||||||||| ||| ||| | |||| | ||||| ||||| |||||||| | | Sbjct 174422 CATTTTGAATGGATCCATTATCAGCAATAAGTTGGTTCTTGATATCGTCATTCCAAAGGT 174481 Query 77086 TCCTCTCTGTTAAAACTCTAAGGAGATGAGGATTAACTATTTGAAA 77131 | | || ||| | | ||||||||||| || || || | ||| Sbjct 174482 TGATTTCGATTAGGTCCTTGAGGAGATGAGGGTTCACAATCTAAAA 174527 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 694653508603040