Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dracunculus_20medinensis_20[genbank_20GCA_5F000946415.1_202014-11- 13] 1,350 sequences; 103,750,844 total letters Query= NC_001875.2 Length=131995 Score E Sequences producing significant alignments: (Bits) Value seq8 86.0 5e-12 >seq8 Length=2239894 Score = 86.0 bits (94), Expect = 5e-12 Identities = 157/230 (68%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 20946 TTTCCCCCTCGCAGCCTGAGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCC 21005 || || || || || | || || | ||| | ||| || ||||| |||||||||||||| Sbjct 1707841 TTGCCACCACGAAGACGCAGAACAAGATGAAGAGTCGATTCCTTCTGAATGTTATAGTCA 1707782 Query 21006 GCCAGGGTTTGGGCGTCCTCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCACG 21065 | || || | | || || |||||||| |||||| | || || | |||||| || Sbjct 1707781 GAAAGCGTGCGCCCATCTTCAAGCTGTTTTCCCGCAAAGATCAGACGCTGCTGATCGGGT 1707722 Query 21066 GGCACGCCTTCCTTGTCGGCGATCTTTTGTTTCACCTGGCCGACAGTATCACCGGGCTCC 21125 || | |||||| ||||| |||||| ||| || | | | ||||| | || Sbjct 1707721 GGGATGCCTTCTTTGTCCTGGATCTTGGCTTTAACGTTTTCAATCGTATCTGATGCTTCG 1707662 Query 21126 GTTTCCACGGTAATGGTCTTGCCGGTTAACGTTTTGACAAATATTTGCAT 21175 ||| | || || ||||| || |||||||| || || ||||||||||| Sbjct 1707661 ACTTCTAAAGTTATCGTCTTCCCAGTTAACGTCTTCACGAATATTTGCAT 1707612 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 422252252516600