Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dracunculus_20medinensis_20[genbank_20GCA_5F000946415.1_202014-11- 13] 1,350 sequences; 103,750,844 total letters Query= NC_001993.1 Length=236120 Score E Sequences producing significant alignments: (Bits) Value seq8 113 7e-20 seq161 95.1 2e-14 >seq8 Length=2239894 Score = 113 bits (124), Expect = 7e-20 Identities = 205/298 (69%), Gaps = 3/298 (1%) Strand=Plus/Plus Query 124539 ATGCAAATATTTATAAAGACACTAACAGGCAAAACTATAACTATAGAGATTGAAGCAAAT 124598 ||||||||||| | ||||| |||| || || || |||||| |||| | |||||| Sbjct 1707612 ATGCAAATATTCGTGAAGACGTTAACTGGGAAGACGATAACTTTAGAAGTCGAAGCATCA 1707671 Query 124599 GATACAATTTCTAATTTAAAACAGAAAATTCAAGATAAAGAAGGTATACCACCTGATCAA 124658 ||||| ||| || | ||| || || || || |||||||| || ||||| ||||| Sbjct 1707672 GATACGATTGAAAACGTTAAAGCCAAGATCCAGGACAAAGAAGGCATCCCACCCGATCAG 1707731 Query 124659 CAAAGGCTTATTTTTGCAGGAAAACAATTAGAGGATAGTCGAACATTAGAAGATTATAAT 124718 || | || || ||||| |||||||| | || ||| | || || | || ||||| Sbjct 1707732 CAGCGTCTGATCTTTGCGGGAAAACAGCTTGAAGATGGGCGCACGCTTTCTGACTATAAC 1707791 Query 124719 ATTCAAAAAGAATCAACTTTGCATTTGGTTTTACGTTTACGAGGTGGTATTAAAAATTCA 124778 ||||| || ||||| ||| | ||| | ||| | ||| | || ||||| | | || | | Sbjct 1707792 ATTCAGAAGGAATCGACTCTTCATCTTGTTCTGCGTCTTCGTGGTGGCAATTAATTTGTA 1707851 Query 124779 TAAAAATTGATTGTAAATAAATATCACTA-CAAATAATTTTATCTGTTAtttttttAT 124835 | | || |||||| |||| || || | |||| || |||| ||| ||||||| Sbjct 1707852 TCGCATTTTTTTGTAA--AAATTTCTGTATCCAATATTTCTATCATTTAACTTTTTAT 1707907 Score = 96.9 bits (106), Expect = 5e-15 Identities = 106/141 (75%), Gaps = 0/141 (0%) Strand=Plus/Plus Query 124538 AATGCAAATATTTATAAAGACACTAACAGGCAAAACTATAACTATAGAGATTGAAGCAAA 124597 ||||||||| || |||| || || || || ||||| ||||| | ||| |||||| | Sbjct 1729790 AATGCAAATTTTCGTAAAAACGCTTACCGGTAAAACGATAACATTGGAGGTTGAAGAATC 1729849 Query 124598 TGATACAATTTCTAATTTAAAACAGAAAATTCAAGATAAAGAAGGTATACCACCTGATCA 124657 ||||| ||| ||| | ||| |||||||| |||| || ||||||||||| ||||| Sbjct 1729850 GGATACTATTGAGAATGTGAAAGCAAAAATTCAGTATAAGGAGGGTATACCACCAGATCA 1729909 Query 124658 ACAAAGGCTTATTTTTGCAGG 124678 ||| | ||||||||||| || Sbjct 1729910 GCAACGCCTTATTTTTGCTGG 1729930 Score = 96.9 bits (106), Expect = 5e-15 Identities = 158/228 (69%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 124538 AATGCAAATATTTATAAAGACACTAACAGGCAAAACTATAACTATAGAGATTGAAGCAAA 124597 ||||||||| || |||| || || || ||||| || || || ||| | ||||| Sbjct 1733570 AATGCAAATTTTCGTAAAAACGCTGACGGGCAAGACAATTACGTTAGCAGTCGAAGCCTC 1733629 Query 124598 TGATACAATTTCTAATTTAAAACAGAAAATTCAAGATAAAGAAGGTATACCACCTGATCA 124657 ||| ||||| | | ||||| || || || || || ||||| || ||||| ||||| Sbjct 1733630 TGACACAATAGAGAGTGTAAAAGCCAAGATCCAGGACAAGGAAGGCATCCCACCCGATCA 1733689 Query 124658 ACAAAGGCTTATTTTTGCAGGAAAACAATTAGAGGATAGTCGAACATTAGAAGATTATAA 124717 || | || || ||||| ||||| ||| | || ||| | || ||| | || ||||| Sbjct 1733690 GCAGCGTCTGATCTTTGCGGGAAAGCAACTTGAAGATGGGCGCACACTTTCTGACTATAA 1733749 Query 124718 TATTCAAAAAGAATCAACTTTGCATTTGGTTTTACGTTTACGAGGTGG 124765 |||||| || ||||| || | ||| | ||| | ||| | || ||||| Sbjct 1733750 TATTCAGAAGGAATCGACGCTTCATCTTGTTCTTCGTCTTCGTGGTGG 1733797 Score = 95.1 bits (104), Expect = 2e-14 Identities = 105/140 (75%), Gaps = 0/140 (0%) Strand=Plus/Plus Query 124539 ATGCAAATATTTATAAAGACACTAACAGGCAAAACTATAACTATAGAGATTGAAGCAAAT 124598 ||||| || || | || || |||| |||||||| ||||| | ||| | ||||| Sbjct 1706478 ATGCAGATTTTCGTGAAAACTTTAACGGGCAAAACAATAACGCTTGAGGTGGAAGCCTCC 1706537 Query 124599 GATACAATTTCTAATTTAAAACAGAAAATTCAAGATAAAGAAGGTATACCACCTGATCAA 124658 |||||||| ||| | || ||||| ||||||||||| || |||||||| |||||| Sbjct 1706538 GATACAATCGAAAATGTGAAGGCAAAAATACAAGATAAAGAGGGAATACCACCAGATCAA 1706597 Query 124659 CAAAGGCTTATTTTTGCAGG 124678 ||| | |||||||||||||| Sbjct 1706598 CAACGCCTTATTTTTGCAGG 1706617 Score = 91.5 bits (100), Expect = 2e-13 Identities = 106/143 (74%), Gaps = 0/143 (0%) Strand=Plus/Plus Query 124539 ATGCAAATATTTATAAAGACACTAACAGGCAAAACTATAACTATAGAGATTGAAGCAAAT 124598 ||||| || ||| | || || |||| || ||||| ||||| |||| |||| ||| Sbjct 1706136 ATGCAGATCTTTGTGAAAACGTTAACTGGTAAAACGATAACGTTAGAAGTTGAGGCATCG 1706195 Query 124599 GATACAATTTCTAATTTAAAACAGAAAATTCAAGATAAAGAAGGTATACCACCTGATCAA 124658 |||||||| ||| | ||| |||||||||||||||||||| || ||||||||||| Sbjct 1706196 GATACAATCGAAAATGTGAAAGCAAAAATTCAAGATAAAGAAGGAATTCCACCTGATCAG 1706255 Query 124659 CAAAGGCTTATTTTTGCAGGAAA 124681 || | | |||||||| || || Sbjct 1706256 CAGCGATTGATTTTTGCGGGTAA 1706278 Score = 87.8 bits (96), Expect = 3e-12 Identities = 106/142 (75%), Gaps = 2/142 (1%) Strand=Plus/Plus Query 124538 AATGCAAATATTTATAAAGACACTAACAGGCAAAACTATAACTATAGAGATTGAAGCAAA 124597 ||||||||| ||| | || || || |||||||| || ||||| | || | ||||| Sbjct 1706904 AATGCAAATTTTTGTGAAAACGCTTACAGGCAAGACGATAACGCTTGAAGTAGAAGCGTC 1706963 Query 124598 TGATACAATTTCTAAT-TTAAAACAGAAAATTCAAGATAAAGAAGGTATACCACCTGATC 124656 ||||| ||| ||| |||| || ||||| |||||||| |||||||||||||| || | Sbjct 1706964 GGATACGATTGAGAATGTTAAGGCA-AAAATACAAGATAAGGAAGGTATACCACCGGACC 1707022 Query 124657 AACAAAGGCTTATTTTTGCAGG 124678 |||| | || || ||||| || Sbjct 1707023 AACAGCGCCTAATATTTGCTGG 1707044 >seq161 Length=136094 Score = 95.1 bits (104), Expect = 2e-14 Identities = 78/95 (82%), Gaps = 0/95 (0%) Strand=Plus/Plus Query 124676 AGGAAAACAATTAGAGGATAGTCGAACATTAGAAGATTATAATATTCAAAAAGAATCAAC 124735 |||||||||| | || ||| |||| ||||| ||||||||||| |||||||||||||| Sbjct 38208 AGGAAAACAACTGGAAGATGGTCGTACATTGTCTGATTATAATATCCAAAAAGAATCAAC 38267 Query 124736 TTTGCATTTGGTTTTACGTTTACGAGGTGGTATTA 124770 | ||||||||| | ||||| |||||||| |||| Sbjct 38268 CCTTCATTTGGTTCTTCGTTTGCGAGGTGGAATTA 38302 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 755443251680000