Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dracunculus_20medinensis_20[genbank_20GCA_5F000946415.1_202014-11- 13] 1,350 sequences; 103,750,844 total letters Query= NC_002169.1 Length=135611 Score E Sequences producing significant alignments: (Bits) Value seq8 89.7 4e-13 >seq8 Length=2239894 Score = 89.7 bits (98), Expect = 4e-13 Identities = 140/198 (71%), Gaps = 2/198 (1%) Strand=Plus/Minus Query 118542 GTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCGAGCTGTTTTCCA 118601 || || || || |||||||| || || | |||||| ||| || ||||||||||| Sbjct 1707808 GTCGATTCCTTCTGAATGTTATAGTCAGAAAGCGTGCGCCCATCTTCAAGCTGTTTTCCC 1707749 Query 118602 GCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGTAATTTTTTGTTTA 118661 || |||| ||||||||||||||||| || ||||| || ||||| || || |||| Sbjct 1707748 GCAAAGATCAGACGCTGCTGATCGGGTGGGATGCCTTCTTTGTCCTGGATCTTGGCTTTA 1707689 Query 118662 ACCTGTTCGACGGTGTCCG-TGCTCTCGACCTCGACGGTCACCGTTTTGCCGGTCAGAGT 118720 || | ||| | || || | |||| ||||| || | || | ||| || || || | || Sbjct 1707688 ACGTTTTCAATCGTATCTGATGCT-TCGACTTCTAAAGTTATCGTCTTCCCAGTTAACGT 1707630 Query 118721 TTTTACAAAAATCTGCAT 118738 || || || || ||||| Sbjct 1707629 CTTCACGAATATTTGCAT 1707612 Score = 89.7 bits (98), Expect = 4e-13 Identities = 138/197 (70%), Gaps = 0/197 (0%) Strand=Plus/Minus Query 118542 GTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCGAGCTGTTTTCCA 118601 || || || || |||||||| || || | |||||| ||| || || || ||||| Sbjct 1730472 GTCGATTCCTTCTGAATGTTATAGTCAGAAAGTGTGCGCCCATCTTCAAGTTGCTTTCCC 1730413 Query 118602 GCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGTAATTTTTTGTTTA 118661 || |||| ||||||||||||||||| || ||||| |||||||| || || ||| Sbjct 1730412 GCAAAGATCAGACGCTGCTGATCGGGTGGGATGCCTTCCTTGTCCTGGATCTTGGCTTTT 1730353 Query 118662 ACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTTGCCGGTCAGAGTT 118721 || || | ||||| | | ||||| | | || | || ||||| ||||| ||| Sbjct 1730352 ACACTCTCTATTGTGTCAGAGGCTTCGACTGCTAACGTAATTGTCTTGCCCGTCAGCGTT 1730293 Query 118722 TTTACAAAAATCTGCAT 118738 ||||| ||||| ||||| Sbjct 1730292 TTTACGAAAATTTGCAT 1730276 Score = 86.0 bits (94), Expect = 5e-12 Identities = 137/197 (70%), Gaps = 0/197 (0%) Strand=Plus/Minus Query 118542 GTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCGAGCTGTTTTCCA 118601 || || || || ||||| || || || | |||||| ||| || || || ||||| Sbjct 1733767 GTCGATTCCTTCTGAATATTATAGTCAGAAAGTGTGCGCCCATCTTCAAGTTGCTTTCCC 1733708 Query 118602 GCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGTAATTTTTTGTTTA 118661 || |||| ||||||||||||||||| || ||||| |||||||| || || ||| Sbjct 1733707 GCAAAGATCAGACGCTGCTGATCGGGTGGGATGCCTTCCTTGTCCTGGATCTTGGCTTTT 1733648 Query 118662 ACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTTGCCGGTCAGAGTT 118721 || || | ||||| | | ||||| | | || | || ||||| ||||| ||| Sbjct 1733647 ACACTCTCTATTGTGTCAGAGGCTTCGACTGCTAACGTAATTGTCTTGCCCGTCAGCGTT 1733588 Query 118722 TTTACAAAAATCTGCAT 118738 ||||| ||||| ||||| Sbjct 1733587 TTTACGAAAATTTGCAT 1733571 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 433823262134200