Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dracunculus_20medinensis_20[genbank_20GCA_5F000946415.1_202014-11- 13] 1,350 sequences; 103,750,844 total letters Query= NC_002331.1 Length=178733 Score E Sequences producing significant alignments: (Bits) Value seq22 93.3 5e-14 seq2 91.5 2e-13 seq97 86.0 7e-12 >seq22 Length=1080441 Score = 93.3 bits (102), Expect = 5e-14 Identities = 69/81 (85%), Gaps = 0/81 (0%) Strand=Plus/Minus Query 60057 AAAAATTTTCTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATAC 60116 ||||| | |||| |||| |||||| |||||| |||||| | ||||||||||| |||| Sbjct 800669 AAAAACTCACTCCCCGGCCGGGAATTGAACCCGGGTCTCGCACGTGACAGGCGCGGATAC 800610 Query 60117 TCACCACTATACTACCGAGGA 60137 ||||||||||||||||||||| Sbjct 800609 TCACCACTATACTACCGAGGA 800589 >seq2 Length=3890600 Score = 91.5 bits (100), Expect = 2e-13 Identities = 64/73 (88%), Gaps = 0/73 (0%) Strand=Plus/Minus Query 60066 CTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACTA 60125 |||| |||| |||||| |||||| |||||| | ||||||||||| ||||||||||||| Sbjct 443970 CTCCCCGGCCGGGAATTGAACCCGGGTCTCGCACGTGACAGGCGCGGATACTCACCACTA 443911 Query 60126 TACTACCGAGGAT 60138 ||||||||||||| Sbjct 443910 TACTACCGAGGAT 443898 >seq97 Length=228809 Score = 86.0 bits (94), Expect = 7e-12 Identities = 70/84 (83%), Gaps = 2/84 (2%) Strand=Plus/Plus Query 60056 GAAAAATTTT--CTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACA 60113 |||||||| |||| |||| | |||| |||||| |||||| | ||||||||||| | Sbjct 136214 GAAAAATTGGGACTCCCCGGCCGCGAATTGAACCCGGGTCTCGCACGTGACAGGCGCGGA 136273 Query 60114 TACTCACCACTATACTACCGAGGA 60137 |||||||||||||||||||||||| Sbjct 136274 TACTCACCACTATACTACCGAGGA 136297 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 571807950578000