Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dracunculus_20medinensis_20[genbank_20GCA_5F000946415.1_202014-11- 13] 1,350 sequences; 103,750,844 total letters Query= NC_003102.1 Length=139342 Score E Sequences producing significant alignments: (Bits) Value seq8 100 3e-16 >seq8 Length=2239894 Score = 100 bits (110), Expect = 3e-16 Identities = 150/213 (70%), Gaps = 0/213 (0%) Strand=Plus/Plus Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252 ||||||||||||||||| || ||||| ||||| || || || | | || ||| | || Sbjct 1730276 ATGCAAATTTTCGTAAAAACGCTGACGGGCAAGACAATTACGTTAGCAGTCGAAGCCTCT 1730335 Query 31253 GACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAG 31312 |||| | || | || ||| | || ||||||||||||| | || ||||| ||| Sbjct 1730336 GACACAATAGAGAGTGTAAAAGCCAAGATCCAGGACAAGGAAGGCATCCCACCCGATCAG 1730395 Query 31313 CAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAAC 31372 |||||||| || || || || || || | ||||| || | || |||||| Sbjct 1730396 CAGCGTCTGATCTTTGCGGGAAAGCAACTTGAAGATGGGCGCACACTTTCTGACTATAAC 1730455 Query 31373 ATTCAAAAAGAATCGACTCTTCATCTGGTACTT 31405 ||||| || |||||||| |||||||| || ||| Sbjct 1730456 ATTCAGAAGGAATCGACGCTTCATCTTGTTCTT 1730488 Score = 98.7 bits (108), Expect = 9e-16 Identities = 149/212 (70%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252 |||||||| ||||| ||||| | || || || ||||| || | || || ||| | || Sbjct 1707612 ATGCAAATATTCGTGAAGACGTTAACTGGGAAGACGATAACTTTAGAAGTCGAAGCATCA 1707671 Query 31253 GACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAG 31312 || | | |||| || ||| | || |||||| |||||| | || ||||| ||| Sbjct 1707672 GATACGATTGAAAACGTTAAAGCCAAGATCCAGGACAAAGAAGGCATCCCACCCGATCAG 1707731 Query 31313 CAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAAC 31372 |||||||| || || || || |||||| | ||||| || | || |||||| Sbjct 1707732 CAGCGTCTGATCTTTGCGGGAAAACAGCTTGAAGATGGGCGCACGCTTTCTGACTATAAC 1707791 Query 31373 ATTCAAAAAGAATCGACTCTTCATCTGGTACT 31404 ||||| || ||||||||||||||||| || || Sbjct 1707792 ATTCAGAAGGAATCGACTCTTCATCTTGTTCT 1707823 Score = 96.9 bits (106), Expect = 3e-15 Identities = 149/213 (70%), Gaps = 0/213 (0%) Strand=Plus/Plus Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252 ||||||||||||||||| || ||||| ||||| || || || | | || ||| | || Sbjct 1733571 ATGCAAATTTTCGTAAAAACGCTGACGGGCAAGACAATTACGTTAGCAGTCGAAGCCTCT 1733630 Query 31253 GACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAG 31312 |||| | || | || ||| | || ||||||||||||| | || ||||| ||| Sbjct 1733631 GACACAATAGAGAGTGTAAAAGCCAAGATCCAGGACAAGGAAGGCATCCCACCCGATCAG 1733690 Query 31313 CAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAAC 31372 |||||||| || || || || || || | ||||| || | || ||||| Sbjct 1733691 CAGCGTCTGATCTTTGCGGGAAAGCAACTTGAAGATGGGCGCACACTTTCTGACTATAAT 1733750 Query 31373 ATTCAAAAAGAATCGACTCTTCATCTGGTACTT 31405 ||||| || |||||||| |||||||| || ||| Sbjct 1733751 ATTCAGAAGGAATCGACGCTTCATCTTGTTCTT 1733783 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 445758877692000