Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dracunculus_20medinensis_20[genbank_20GCA_5F000946415.1_202014-11- 13] 1,350 sequences; 103,750,844 total letters Query= NC_003310.1 Length=196858 Score E Sequences producing significant alignments: (Bits) Value seq51 87.8 2e-12 >seq51 Length=402594 Score = 87.8 bits (96), Expect = 2e-12 Identities = 111/153 (73%), Gaps = 0/153 (0%) Strand=Plus/Plus Query 64017 ttttttGTTTCCTTGTGTAGATTTGATATGGCTATTCTGGCGGCTAGAATGGCATAATCC 64076 |||| ||| | || |||| |||||| |||||||| | || || ||||| ||||||||| Sbjct 118614 TTTTCTGTATTTTTATGTAAATTTGAAATGGCTATCCGCGCAGCAAGAATTGCATAATCC 118673 Query 64077 GGATGTTGTGTAGTACAAGTGGCTGCTATTTCGGCTGCCAGAGTGTCCAATTCTACCGTT 64136 ||||| ||| || | || ||| |||| || || ||| | |||||||| | ||| Sbjct 118674 GGATGAATTGTTGTCATATCAGCAGCTGTTTCTGCCGCAAGATTATCCAATTCGGCGGTT 118733 Query 64137 GTTACTCCATTATATATTCCTTGAATAACCTTC 64169 | ||| || ||||| | ||| ||| |||||| Sbjct 118734 GATACGCCTTTATAAAGTCCCATAATCACCTTC 118766 Score = 82.4 bits (90), Expect = 1e-10 Identities = 112/154 (73%), Gaps = 2/154 (1%) Strand=Plus/Plus Query 63728 CTCAATAGCTGAGTCTATATCCCATTGATGAATTCCTACTGCGACACGCATTAACATGTG 63787 |||||| |||| || ||||| || |||||| || || || || ||||| |||||||| Sbjct 118109 CTCAATGACTGAATCGATATCGTCTTTATGAATACCGACCGCTACTCGCATAAACATGTG 118168 Query 63788 CTGAGGTCTTTCAACAATTTTGTTGTTTATTT-TCAACAAGTAGGATTTTTCCAAAGTTT 63846 ||| || | ||| | ||| | || |||| |||| | ||| ||| | || | |||| Sbjct 118169 CTGTGGACGTTCTATAATGCCG-GATTCATTTCTCAAAAGGTAAGATCTCTCAAGCGTTT 118227 Query 63847 TAAAACCAAAATAGTTGTATGAAAAGTCTCGTTC 63880 |||| |||||||| || | |||||||| || || Sbjct 118228 TAAACCCAAAATATGTGAAAGAAAAGTCGCGATC 118261 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 629806971828000