Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dracunculus_20medinensis_20[genbank_20GCA_5F000946415.1_202014-11- 13] 1,350 sequences; 103,750,844 total letters Query= NC_003663.2 Length=224499 Score E Sequences producing significant alignments: (Bits) Value seq51 111 2e-19 >seq51 Length=402594 Score = 111 bits (122), Expect = 2e-19 Identities = 174/248 (70%), Gaps = 6/248 (2%) Strand=Plus/Plus Query 79843 TATTGTGTATATAATCGTTCGAACTCGTCTCCCCAAACATCGTCTAATCCAGGACATTCG 79902 || || ||||| | | ||| || || ||||||||| ||| || | ||| ||| |||| Sbjct 115708 TACTGAGTATAAAGTTTTTCAAATTCCTCTCCCCAACAATCTTCAAGTCCGGGAGATTCA 115767 Query 79903 TCAGGACACATCAACGACCACTCTCCATCATCCTTTACTCGTTTCATAAAGAGATCAGGA 79962 ||||||||||| ||||| || | |||| |||||||| ||||| || ||||| ||| Sbjct 115768 GAAGGACACATCAGTGACCAATCACTATCACTGTTTACTCGGTTCATGAAAAGATCGGGA 115827 Query 79963 ATCCAAAGAGCTATAAATAGATCTCTGGTTCTATGCTCC---TCGTTTCCTGTATTCTTT 80019 | ||| | | | | ||| ||||||| | | ||||| || | || ||| ||| Sbjct 115828 ACCCATAAACCAAAAAAGAGATCTC---GACAACGCTCCAATTCATCGCCGAAATTTTTT 115884 Query 80020 TTAAGATCGAGGAACGCCATAATATCAGAATGCCACGGTTCCAAGTATATGGCCATAACT 80079 | | ||| || | | | |||||| | |||||| |||||||| ||||| || | | || Sbjct 115885 CTTAAATCTAGATATTCAAAAATATCGGCATGCCATGGTTCCAAATATATTGCAAAAGCT 115944 Query 80080 CCCGGTCG 80087 || ||||| Sbjct 115945 CCAGGTCG 115952 Score = 91.5 bits (100), Expect = 2e-13 Identities = 114/154 (74%), Gaps = 2/154 (1%) Strand=Plus/Plus Query 80400 CTCAATAGCTGATTCTATATCCCATTGATGAATTCCTACCGCGACACGCATTAACATGTG 80459 |||||| |||| || ||||| || |||||| || ||||| || ||||| |||||||| Sbjct 118109 CTCAATGACTGAATCGATATCGTCTTTATGAATACCGACCGCTACTCGCATAAACATGTG 118168 Query 80460 CTGAGGTCTTTCAACGATCTTGTTATTTATTT-TCAACAAGTAAGATTTTTCCAAAGTTT 80518 ||| || | ||| | || | ||| |||| |||| | ||||||| | || | |||| Sbjct 118169 CTGTGGACGTTCTATAATGCCG-GATTCATTTCTCAAAAGGTAAGATCTCTCAAGCGTTT 118227 Query 80519 TAAAACCAAAATAGTTGTATGAAAAGTCTCGTTC 80552 |||| |||||||| || | |||||||| || || Sbjct 118228 TAAACCCAAAATATGTGAAAGAAAAGTCGCGATC 118261 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 718256679214000