Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dracunculus_20medinensis_20[genbank_20GCA_5F000946415.1_202014-11- 13] 1,350 sequences; 103,750,844 total letters Query= NC_004117.1 Length=158482 Score E Sequences producing significant alignments: (Bits) Value seq8 129 6e-25 >seq8 Length=2239894 Score = 129 bits (142), Expect = 6e-25 Identities = 167/231 (72%), Gaps = 0/231 (0%) Strand=Plus/Minus Query 142954 ATGGCCTCCTCGTAAACGCAAAACTAAATGAATTGTAGATTCTTTTTGTATGTTGTAATC 143013 || ||| || || | ||||| ||| | ||||| || ||||| || || ||||| || || Sbjct 1707842 ATTGCCACCACGAAGACGCAGAACAAGATGAAGAGTCGATTCCTTCTGAATGTTATAGTC 1707783 Query 143014 GCTCATTGTGCTCGAGTCTTCGAGTTGTTTACCAGCATAGATCAGACGTTGCTGATCGGG 143073 | |||| | ||||| || ||||| || ||| |||||||||| ||||||||||| Sbjct 1707782 AGAAAGCGTGCGCCCATCTTCAAGCTGTTTTCCCGCAAAGATCAGACGCTGCTGATCGGG 1707723 Query 143074 AGGTATGCCTTCTTTGTCGGTAATTTTTTGTTTTAGCTGTTCCACCGTGTCCGTGGGTTC 143133 || |||||||||||||| || || ||| | | ||| | ||| || | | ||| Sbjct 1707722 TGGGATGCCTTCTTTGTCCTGGATCTTGGCTTTAACGTTTTCAATCGTATCTGATGCTTC 1707663 Query 143134 TACTTCAACAGTCACCGTCTTGCCGGTCAATGTTTTTACGAATATTTGCAT 143184 ||||| | ||| | |||||| || || || || || |||||||||||||| Sbjct 1707662 GACTTCTAAAGTTATCGTCTTCCCAGTTAACGTCTTCACGAATATTTGCAT 1707612 Score = 120 bits (132), Expect = 3e-22 Identities = 165/231 (71%), Gaps = 0/231 (0%) Strand=Plus/Minus Query 142954 ATGGCCTCCTCGTAAACGCAAAACTAAATGAATTGTAGATTCTTTTTGTATGTTGTAATC 143013 || ||| || || | ||| | ||| | ||||| || ||||| || || ||||| || || Sbjct 1730506 ATTGCCACCACGAAGACGAAGAACAAGATGAAGCGTCGATTCCTTCTGAATGTTATAGTC 1730447 Query 143014 GCTCATTGTGCTCGAGTCTTCGAGTTGTTTACCAGCATAGATCAGACGTTGCTGATCGGG 143073 | ||||| | ||||| ||||| || || ||| |||||||||| ||||||||||| Sbjct 1730446 AGAAAGTGTGCGCCCATCTTCAAGTTGCTTTCCCGCAAAGATCAGACGCTGCTGATCGGG 1730387 Query 143074 AGGTATGCCTTCTTTGTCGGTAATTTTTTGTTTTAGCTGTTCCACCGTGTCCGTGGGTTC 143133 || |||||||| ||||| || || ||||| || | ||||| | || ||| Sbjct 1730386 TGGGATGCCTTCCTTGTCCTGGATCTTGGCTTTTACACTCTCTATTGTGTCAGAGGCTTC 1730327 Query 143134 TACTTCAACAGTCACCGTCTTGCCGGTCAATGTTTTTACGAATATTTGCAT 143184 ||| | | || | |||||||| |||| ||||||||||| |||||||| Sbjct 1730326 GACTGCTAACGTAATTGTCTTGCCCGTCAGCGTTTTTACGAAAATTTGCAT 1730276 Score = 114 bits (126), Expect = 1e-20 Identities = 164/231 (71%), Gaps = 0/231 (0%) Strand=Plus/Minus Query 142954 ATGGCCTCCTCGTAAACGCAAAACTAAATGAATTGTAGATTCTTTTTGTATGTTGTAATC 143013 || ||| || || | ||| | ||| | ||||| || ||||| || || || || || || Sbjct 1733801 ATTGCCACCACGAAGACGAAGAACAAGATGAAGCGTCGATTCCTTCTGAATATTATAGTC 1733742 Query 143014 GCTCATTGTGCTCGAGTCTTCGAGTTGTTTACCAGCATAGATCAGACGTTGCTGATCGGG 143073 | ||||| | ||||| ||||| || || ||| |||||||||| ||||||||||| Sbjct 1733741 AGAAAGTGTGCGCCCATCTTCAAGTTGCTTTCCCGCAAAGATCAGACGCTGCTGATCGGG 1733682 Query 143074 AGGTATGCCTTCTTTGTCGGTAATTTTTTGTTTTAGCTGTTCCACCGTGTCCGTGGGTTC 143133 || |||||||| ||||| || || ||||| || | ||||| | || ||| Sbjct 1733681 TGGGATGCCTTCCTTGTCCTGGATCTTGGCTTTTACACTCTCTATTGTGTCAGAGGCTTC 1733622 Query 143134 TACTTCAACAGTCACCGTCTTGCCGGTCAATGTTTTTACGAATATTTGCAT 143184 ||| | | || | |||||||| |||| ||||||||||| |||||||| Sbjct 1733621 GACTGCTAACGTAATTGTCTTGCCCGTCAGCGTTTTTACGAAAATTTGCAT 1733571 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 507005844132000