Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dracunculus_20medinensis_20[genbank_20GCA_5F000946415.1_202014-11- 13] 1,350 sequences; 103,750,844 total letters Query= NC_005309.1 Length=359853 Score E Sequences producing significant alignments: (Bits) Value seq8 152 1e-31 seq161 105 2e-17 >seq8 Length=2239894 Score = 152 bits (168), Expect = 1e-31 Identities = 162/214 (76%), Gaps = 0/214 (0%) Strand=Plus/Minus Query 104347 AAGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTC 104406 ||| || ||||| | || ||||| |||||||||||||||||||| || || | || || Sbjct 1733783 AAGAACAAGATGAAGCGTCGATTCCTTCTGAATATTATAGTCAGAAAGTGTGCGCCCATC 1733724 Query 104407 TTCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATC 104466 ||| ||||| ||||| ||||| || || | ||| ||||| || || || ||||| || || Sbjct 1733723 TTCAAGTTGCTTTCCCGCAAAGATCAGACGCTGCTGATCGGGTGGGATGCCTTCCTTGTC 1733664 Query 104467 CTGAATCTTTGCTTTTACATTTTCTACGGTATCGCTAGGTTCTACCTCTAGTGTAATAGT 104526 ||| ||||| ||||||||| | |||| || || | ||| || ||| ||||| || Sbjct 1733663 CTGGATCTTGGCTTTTACACTCTCTATTGTGTCAGAGGCTTCGACTGCTAACGTAATTGT 1733604 Query 104527 CTTACCAGTAAGTGTTTTTACAAATATCTGCATT 104560 ||| || || || |||||||| || || |||||| Sbjct 1733603 CTTGCCCGTCAGCGTTTTTACGAAAATTTGCATT 1733570 Score = 147 bits (162), Expect = 5e-30 Identities = 161/214 (75%), Gaps = 0/214 (0%) Strand=Plus/Minus Query 104347 AAGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTC 104406 ||| || ||||| | || ||||| |||||||| ||||||||||| || || | || || Sbjct 1730488 AAGAACAAGATGAAGCGTCGATTCCTTCTGAATGTTATAGTCAGAAAGTGTGCGCCCATC 1730429 Query 104407 TTCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATC 104466 ||| ||||| ||||| ||||| || || | ||| ||||| || || || ||||| || || Sbjct 1730428 TTCAAGTTGCTTTCCCGCAAAGATCAGACGCTGCTGATCGGGTGGGATGCCTTCCTTGTC 1730369 Query 104467 CTGAATCTTTGCTTTTACATTTTCTACGGTATCGCTAGGTTCTACCTCTAGTGTAATAGT 104526 ||| ||||| ||||||||| | |||| || || | ||| || ||| ||||| || Sbjct 1730368 CTGGATCTTGGCTTTTACACTCTCTATTGTGTCAGAGGCTTCGACTGCTAACGTAATTGT 1730309 Query 104527 CTTACCAGTAAGTGTTTTTACAAATATCTGCATT 104560 ||| || || || |||||||| || || |||||| Sbjct 1730308 CTTGCCCGTCAGCGTTTTTACGAAAATTTGCATT 1730275 Score = 143 bits (158), Expect = 6e-29 Identities = 159/212 (75%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 104348 AGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCT 104407 || || ||||| | || ||||| |||||||| ||||||||||| || || | || ||| Sbjct 1707823 AGAACAAGATGAAGAGTCGATTCCTTCTGAATGTTATAGTCAGAAAGCGTGCGCCCATCT 1707764 Query 104408 TCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCC 104467 || || |||||||| ||||| || || | ||| ||||| || || || |||||||| ||| Sbjct 1707763 TCAAGCTGTTTTCCCGCAAAGATCAGACGCTGCTGATCGGGTGGGATGCCTTCTTTGTCC 1707704 Query 104468 TGAATCTTTGCTTTTACATTTTCTACGGTATCGCTAGGTTCTACCTCTAGTGTAATAGTC 104527 || ||||| ||||| || ||||| | ||||| | ||| || |||| || || ||| Sbjct 1707703 TGGATCTTGGCTTTAACGTTTTCAATCGTATCTGATGCTTCGACTTCTAAAGTTATCGTC 1707644 Query 104528 TTACCAGTAAGTGTTTTTACAAATATCTGCAT 104559 || ||||| | || || || ||||| ||||| Sbjct 1707643 TTCCCAGTTAACGTCTTCACGAATATTTGCAT 1707612 Score = 111 bits (122), Expect = 4e-19 Identities = 109/141 (77%), Gaps = 0/141 (0%) Strand=Plus/Minus Query 104420 CCAGCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCCTGAATCTTTGCT 104479 || || ||||| || | ||| ||||| || || || |||||||||||||||||||| || Sbjct 1707394 CCTGCGAAAATAAGACGCTGCTGATCCGGCGGGATACCTTCTTTATCCTGAATCTTGGCC 1707335 Query 104480 TTTACATTTTCTACGGTATCGCTAGGTTCTACCTCTAGTGTAATAGTCTTACCAGTAAGT 104539 || |||||||| | ||||| | ||| || || | ||| || || ||||||||||| Sbjct 1707334 TTAACATTTTCAATCGTATCTGACGCTTCGACTTCCAATGTTATCGTTTTACCAGTAAGA 1707275 Query 104540 GTTTTTACAAATATCTGCATT 104560 ||||| ||||| || |||||| Sbjct 1707274 GTTTTGACAAAAATTTGCATT 1707254 Score = 109 bits (120), Expect = 1e-18 Identities = 110/143 (77%), Gaps = 0/143 (0%) Strand=Plus/Minus Query 104417 TTTCCAGCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCCTGAATCTTT 104476 || || |||||||| | | ||| |||||||| || |||||||||||||| ||||| ||| Sbjct 1706278 TTACCCGCAAAAATCAATCGCTGCTGATCAGGTGGAATTCCTTCTTTATCTTGAATTTTT 1706219 Query 104477 GCTTTTACATTTTCTACGGTATCGCTAGGTTCTACCTCTAGTGTAATAGTCTTACCAGTA 104536 ||||| |||||||| | ||||| | || || |||| || || || |||||||| Sbjct 1706218 GCTTTCACATTTTCGATTGTATCCGATGCCTCAACTTCTAACGTTATCGTTTTACCAGTT 1706159 Query 104537 AGTGTTTTTACAAATATCTGCAT 104559 | ||||| ||||| |||||||| Sbjct 1706158 AACGTTTTCACAAAGATCTGCAT 1706136 Score = 107 bits (118), Expect = 4e-18 Identities = 107/139 (77%), Gaps = 0/139 (0%) Strand=Plus/Minus Query 104422 AGCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCCTGAATCTTTGCTTT 104481 ||| ||||| || | ||| || || || ||||| || ||||||| ||||||||| || || Sbjct 1729526 AGCGAAAATAAGGCGCTGCTGGTCTGGTGGTATACCCTCTTTATACTGAATCTTCGCCTT 1729467 Query 104482 TACATTTTCTACGGTATCGCTAGGTTCTACCTCTAGTGTAATAGTCTTACCAGTAAGTGT 104541 |||||| || |||||||| | ||| || || | || || || ||||||||||| || Sbjct 1729466 TACATTCTCAACGGTATCCGATGCTTCGACTTCCAATGCTATCGTTTTACCAGTAAGCGT 1729407 Query 104542 TTTTACAAATATCTGCATT 104560 ||||||| | || |||||| Sbjct 1729406 TTTTACACAAATTTGCATT 1729388 Score = 102 bits (112), Expect = 2e-16 Identities = 107/141 (76%), Gaps = 0/141 (0%) Strand=Plus/Minus Query 104420 CCAGCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCCTGAATCTTTGCT 104479 ||||||||||| || | || ||||| || ||||| || || |||| |||||| |||||| Sbjct 1729930 CCAGCAAAAATAAGGCGTTGCTGATCTGGTGGTATACCCTCCTTATACTGAATTTTTGCT 1729871 Query 104480 TTTACATTTTCTACGGTATCGCTAGGTTCTACCTCTAGTGTAATAGTCTTACCAGTAAGT 104539 || ||||| || | ||||| ||| ||||| | ||| || || ||||| ||||| Sbjct 1729870 TTCACATTCTCAATAGTATCCGATTCTTCAACCTCCAATGTTATCGTTTTACCGGTAAGC 1729811 Query 104540 GTTTTTACAAATATCTGCATT 104560 |||||||| || || |||||| Sbjct 1729810 GTTTTTACGAAAATTTGCATT 1729790 >seq161 Length=136094 Score = 105 bits (116), Expect = 2e-17 Identities = 108/141 (77%), Gaps = 0/141 (0%) Strand=Plus/Minus Query 104420 CCAGCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCCTGAATCTTTGCT 104479 ||||| ||||| | | ||| || || || || |||||||| || |||||||||||||| Sbjct 38056 CCAGCGAAAATCAAACGCTGCTGGTCGGGTGGAATTCCTTCCTTGTCCTGAATCTTTGCC 37997 Query 104480 TTTACATTTTCTACGGTATCGCTAGGTTCTACCTCTAGTGTAATAGTCTTACCAGTAAGT 104539 || ||||| || | ||||| | ||| || || ||||| || ||||||||||| | | Sbjct 37996 TTGACATTCTCAATAGTATCCGATGCTTCAACTTCAAGTGTTATTGTCTTACCAGTCAAT 37937 Query 104540 GTTTTTACAAATATCTGCATT 104560 ||||| || || ||||||||| Sbjct 37936 GTTTTCACGAAAATCTGCATT 37916 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1151378484405800