Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dracunculus_20medinensis_20[genbank_20GCA_5F000946415.1_202014-11- 13] 1,350 sequences; 103,750,844 total letters Query= NC_006639.1 Length=24748 Score E Sequences producing significant alignments: (Bits) Value seq245 192 9e-45 seq118 185 1e-42 >seq245 Length=71395 Score = 192 bits (212), Expect = 9e-45 Identities = 208/273 (76%), Gaps = 2/273 (1%) Strand=Plus/Minus Query 16432 CGCTAAGCGTCATCGCAGATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTAT 16491 ||||||||||||||| | | |||||||||||| |||||||| || || ||||| || || Sbjct 61923 CGCTAAGCGTCATCGTAAAGTTCTTCGAGATAATATCCAAGGTATAACGAAGCCTGCCAT 61864 Query 16492 CCGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGAT 16551 ||||| || || ||||||||||| || || || | ||||| || |||||||||| | Sbjct 61863 ACGTCGACTTGCGCGTCGTGGTGGTGTTAAACGAATTTCTGGTTTAATCTATGAAGAAAC 61804 Query 16552 TCGTGATGTTTTGAAGATCTTCCTCAAGACCGTTATCCATGATGCT-TTCCACTATACCG 16610 |||| ||| |||| | ||||| | | ||||||| ||||||| || || ||| | Sbjct 61803 CCGTGGTGTGCTGAAAGTATTCCTTGAAAATGTTATCCGTGATGCTGTTACA-TATTGTG 61745 Query 16611 AGCACGCTAAACGTAAGACTGTCACCTCCATGGATATCGTCTATGCATTGAAACGTCAAG 16670 | || || || | || || ||||| | ||||| ||||||||||||| |||||||| | Sbjct 61744 AACATGCGAAGAGGAAAACCGTCACTGCTATGGACGTCGTCTATGCATTAAAACGTCAGG 61685 Query 16671 GCCGTAAGATTTATGGTTTTGGAAGTTAATCTT 16703 |||||| | |||| |||||||| ||||| ||| Sbjct 61684 GCCGTACGCTTTACGGTTTTGGTGGTTAAACTT 61652 >seq118 Length=191856 Score = 185 bits (204), Expect = 1e-42 Identities = 204/269 (76%), Gaps = 2/269 (1%) Strand=Plus/Plus Query 16432 CGCTAAGCGTCATCGCAGATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTAT 16491 |||||| |||||||| | | |||||| ||||| |||||||| || || ||||| || || Sbjct 7758 CGCTAAACGTCATCGTAAAGTTCTTCGCGATAATATCCAAGGTATAACGAAGCCTGCCAT 7817 Query 16492 CCGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGAT 16551 ||||| || || ||||||||||| || || || | ||||| || |||||||||| | Sbjct 7818 ACGTCGACTTGCGCGTCGTGGTGGTGTTAAACGAATTTCTGGTTTAATCTATGAAGAAAC 7877 Query 16552 TCGTGATGTTTTGAAGATCTTCCTCAAGACCGTTATCCATGATGCT-TTCCACTATACCG 16610 |||| ||| |||| | ||||| | | ||||||| ||||||| || || ||| || Sbjct 7878 CCGTGGTGTGCTGAAAGTATTCCTTGAAAATGTTATCCGTGATGCTGTTACA-TATTGCG 7936 Query 16611 AGCACGCTAAACGTAAGACTGTCACCTCCATGGATATCGTCTATGCATTGAAACGTCAAG 16670 | || || || | || || ||||| | ||||| ||||||||||||| |||||||| | Sbjct 7937 AACATGCGAAGAGGAAAACCGTCACTGCTATGGACGTCGTCTATGCATTAAAACGTCAGG 7996 Query 16671 GCCGTAAGATTTATGGTTTTGGAAGTTAA 16699 |||||| | |||| |||||||| ||||| Sbjct 7997 GCCGTACGCTTTACGGTTTTGGTGGTTAA 8025 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 79073965685550