Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dracunculus_20medinensis_20[genbank_20GCA_5F000946415.1_202014-11- 13] 1,350 sequences; 103,750,844 total letters Query= NC_007921.1 Length=147544 Score E Sequences producing significant alignments: (Bits) Value seq8 87.8 2e-12 >seq8 Length=2239894 Score = 87.8 bits (96), Expect = 2e-12 Identities = 156/228 (68%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 131007 GCCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCT 131066 |||||| || | ||| || || | ||| | ||||| ||||| |||||||| || || Sbjct 1730503 GCCACCACGAAGACGAAGAACAAGATGAAGCGTCGATTCCTTCTGAATGTTATAGTCAGA 1730444 Query 131067 CATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGG 131126 | |||||| || || || ||||| || || |||| | ||||||||| || || || Sbjct 1730443 AAGTGTGCGCCCATCTTCAAGTTGCTTTCCCGCAAAGATCAGACGCTGCTGATCGGGTGG 1730384 Query 131127 GATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGAT 131186 ||| ||||| ||||| ||| || || | ||| | || || | || |||| Sbjct 1730383 GATGCCTTCCTTGTCCTGGATCTTGGCTTTTACACTCTCTATTGTGTCAGAGGCTTCGAC 1730324 Query 131187 GTCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCAT 131234 | | |||| || || || || || |||||||||||||| ||||| Sbjct 1730323 TGCTAACGTAATTGTCTTGCCCGTCAGCGTTTTTACGAAAATTTGCAT 1730276 Score = 86.0 bits (94), Expect = 6e-12 Identities = 100/135 (74%), Gaps = 0/135 (0%) Strand=Plus/Minus Query 131007 GCCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCT 131066 |||||| || | |||||| || | ||| | ||||| ||||| |||||||| || || Sbjct 1707839 GCCACCACGAAGACGCAGAACAAGATGAAGAGTCGATTCCTTCTGAATGTTATAGTCAGA 1707780 Query 131067 CATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGG 131126 | |||||| || || ||||| || || || |||| | ||||||||| || || || Sbjct 1707779 AAGCGTGCGCCCATCTTCAAGCTGTTTTCCCGCAAAGATCAGACGCTGCTGATCGGGTGG 1707720 Query 131127 GATTCCTTCTTTGTC 131141 ||| ||||||||||| Sbjct 1707719 GATGCCTTCTTTGTC 1707705 Score = 82.4 bits (90), Expect = 7e-11 Identities = 155/228 (68%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 131007 GCCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCT 131066 |||||| || | ||| || || | ||| | ||||| ||||| ||||| || || || Sbjct 1733798 GCCACCACGAAGACGAAGAACAAGATGAAGCGTCGATTCCTTCTGAATATTATAGTCAGA 1733739 Query 131067 CATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGG 131126 | |||||| || || || ||||| || || |||| | ||||||||| || || || Sbjct 1733738 AAGTGTGCGCCCATCTTCAAGTTGCTTTCCCGCAAAGATCAGACGCTGCTGATCGGGTGG 1733679 Query 131127 GATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGAT 131186 ||| ||||| ||||| ||| || || | ||| | || || | || |||| Sbjct 1733678 GATGCCTTCCTTGTCCTGGATCTTGGCTTTTACACTCTCTATTGTGTCAGAGGCTTCGAC 1733619 Query 131187 GTCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCAT 131234 | | |||| || || || || || |||||||||||||| ||||| Sbjct 1733618 TGCTAACGTAATTGTCTTGCCCGTCAGCGTTTTTACGAAAATTTGCAT 1733571 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 472004834784000