Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dracunculus_20medinensis_20[genbank_20GCA_5F000946415.1_202014-11- 13] 1,350 sequences; 103,750,844 total letters Query= NC_008293.1 Length=135454 Score E Sequences producing significant alignments: (Bits) Value seq8 86.0 5e-12 >seq8 Length=2239894 Score = 86.0 bits (94), Expect = 5e-12 Identities = 107/144 (74%), Gaps = 2/144 (1%) Strand=Plus/Plus Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058 ||||| || ||||| || || || || |||||| | || || | ||||| ||| | || Sbjct 1706136 ATGCAGATCTTTGTGAAAACGTTAACTGGTAAAACGATAACGTTAGAAGTTGAGGCATCG 1706195 Query 25059 GACACTATCGAGTCACTGAA-GCAAAAAATCACTGACAAAGAAGGGATTCCACCTGACCA 25117 || || ||||| |||| ||||||| ||| || |||||||| ||||||||||| || Sbjct 1706196 GATACAATCGAAAATGTGAAAGCAAAAATTCAA-GATAAAGAAGGAATTCCACCTGATCA 1706254 Query 25118 ACAGCGGATTATTTTTGCCGGCAA 25141 ||||| | |||||||| || || Sbjct 1706255 GCAGCGATTGATTTTTGCGGGTAA 1706278 Score = 82.4 bits (90), Expect = 7e-11 Identities = 160/234 (68%), Gaps = 2/234 (1%) Strand=Plus/Plus Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058 ||||||||||| || ||||| || || || || | || || | ||||| || | || Sbjct 1707612 ATGCAAATATTCGTGAAGACGTTAACTGGGAAGACGATAACTTTAGAAGTCGAAGCATCA 1707671 Query 25059 GACACTATCGAGT-CACTGAAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGACCA 25117 || || || || | | |||| || | || ||||||||||| || ||||| || || Sbjct 1707672 GATACGATTGAAAACGTTAAAGCCAAGATCCAG-GACAAAGAAGGCATCCCACCCGATCA 1707730 Query 25118 ACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACAA 25177 ||||| | || ||||| || ||||| | ||||||| ||||| | || || || Sbjct 1707731 GCAGCGTCTGATCTTTGCGGGAAAACAGCTTGAAGATGGGCGCACGCTTTCTGACTATAA 1707790 Query 25178 TATTCAAAAAGAATCCACGCTACATTTAGTGCTAAGGCTAAGAGGAGGAAATTA 25231 ||||| || ||||| || || ||| | || || | || | || || ||||| Sbjct 1707791 CATTCAGAAGGAATCGACTCTTCATCTTGTTCTGCGTCTTCGTGGTGGCAATTA 1707844 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 433320870400250