Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dracunculus_20medinensis_20[genbank_20GCA_5F000946415.1_202014-11- 13] 1,350 sequences; 103,750,844 total letters Query= NC_008586.1 Length=131204 Score E Sequences producing significant alignments: (Bits) Value seq8 113 4e-20 seq5 98.7 8e-16 seq161 86.0 5e-12 >seq8 Length=2239894 Score = 113 bits (124), Expect = 4e-20 Identities = 109/140 (78%), Gaps = 0/140 (0%) Strand=Plus/Plus Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278 ||||| ||||| || ||||||||||| || ||||| | || ||||| |||||| || || Sbjct 1706478 ATGCAGATTTTCGTGAAAACTTTAACGGGCAAAACAATAACGCTTGAGGTGGAAGCCTCC 1706537 Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338 ||||| | || || | || |||||| ||||| || ||||| || ||||| |||||| Sbjct 1706538 GATACAATCGAAAATGTGAAGGCAAAAATACAAGATAAAGAGGGAATACCACCAGATCAA 1706597 Query 22339 CAACGTCTTATATTTGCCGG 22358 ||||| ||||| ||||| || Sbjct 1706598 CAACGCCTTATTTTTGCAGG 1706617 Score = 111 bits (122), Expect = 1e-19 Identities = 154/216 (71%), Gaps = 0/216 (0%) Strand=Plus/Plus Query 22218 GATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCAC 22277 ||||||||| || || || || ||||| || || ||| | ||| | ||||| ||| | | Sbjct 1707611 GATGCAAATATTCGTGAAGACGTTAACTGGGAAGACGATAACTTTAGAAGTCGAAGCATC 1707670 Query 22278 CGATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCA 22337 ||||| | || | | ||| || || || ||||| || || || ||||||||||| Sbjct 1707671 AGATACGATTGAAAACGTTAAAGCCAAGATCCAGGACAAAGAAGGCATCCCACCCGATCA 1707730 Query 22338 ACAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAA 22397 || ||||| || ||||| || |||||| | || ||| ||||| | || || || || Sbjct 1707731 GCAGCGTCTGATCTTTGCGGGAAAACAGCTTGAAGATGGGCGCACGCTTTCTGACTATAA 1707790 Query 22398 CATTCAAAAAGAATCCACCATACATTTAGTTTTGCG 22433 |||||| || ||||| || | ||| | ||| |||| Sbjct 1707791 CATTCAGAAGGAATCGACTCTTCATCTTGTTCTGCG 1707826 Score = 95.1 bits (104), Expect = 1e-14 Identities = 105/140 (75%), Gaps = 0/140 (0%) Strand=Plus/Plus Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278 |||||||||||||| ||||| | || || || ||| | || |||||||| ||| | | Sbjct 1706905 ATGCAAATTTTTGTGAAAACGCTTACAGGCAAGACGATAACGCTTGAAGTAGAAGCGTCG 1706964 Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338 ||||| | || || | || |||||| ||||| ||||| ||||| ||||| || ||| Sbjct 1706965 GATACGATTGAGAATGTTAAGGCAAAAATACAAGATAAGGAAGGTATACCACCGGACCAA 1707024 Query 22339 CAACGTCTTATATTTGCCGG 22358 || || || |||||||| || Sbjct 1707025 CAGCGCCTAATATTTGCTGG 1707044 Score = 95.1 bits (104), Expect = 1e-14 Identities = 105/140 (75%), Gaps = 0/140 (0%) Strand=Plus/Plus Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278 ||||||||||| || ||||| | |||||||||||| | || | || || ||| | Sbjct 1729791 ATGCAAATTTTCGTAAAAACGCTTACCGGTAAAACGATAACATTGGAGGTTGAAGAATCG 1729850 Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338 ||||| | || || | ||| ||||||||| | ||||||||||| ||||| ||||| Sbjct 1729851 GATACTATTGAGAATGTGAAAGCAAAAATTCAGTATAAGGAGGGTATACCACCAGATCAG 1729910 Query 22339 CAACGTCTTATATTTGCCGG 22358 ||||| ||||| ||||| || Sbjct 1729911 CAACGCCTTATTTTTGCTGG 1729930 Score = 87.8 bits (96), Expect = 2e-12 Identities = 105/143 (73%), Gaps = 0/143 (0%) Strand=Plus/Plus Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278 ||||| || ||||| ||||| ||||| ||||||||| | || | ||||| || | | Sbjct 1706136 ATGCAGATCTTTGTGAAAACGTTAACTGGTAAAACGATAACGTTAGAAGTTGAGGCATCG 1706195 Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338 ||||| | || || | ||| |||||||||||| || || || |||||||| ||||| Sbjct 1706196 GATACAATCGAAAATGTGAAAGCAAAAATTCAAGATAAAGAAGGAATTCCACCTGATCAG 1706255 Query 22339 CAACGTCTTATATTTGCCGGCAA 22361 || || | || ||||| || || Sbjct 1706256 CAGCGATTGATTTTTGCGGGTAA 1706278 Score = 86.0 bits (94), Expect = 5e-12 Identities = 145/210 (69%), Gaps = 0/210 (0%) Strand=Plus/Plus Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278 ||||||||||| || ||||| | || || || || | || | | ||| ||| || | Sbjct 1730276 ATGCAAATTTTCGTAAAAACGCTGACGGGCAAGACAATTACGTTAGCAGTCGAAGCCTCT 1730335 Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338 || || | || | | ||| || || || |||||||| || || ||||||||||| Sbjct 1730336 GACACAATAGAGAGTGTAAAAGCCAAGATCCAGGACAAGGAAGGCATCCCACCCGATCAG 1730395 Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398 || ||||| || ||||| || || || | || ||| ||||| | || || || ||| Sbjct 1730396 CAGCGTCTGATCTTTGCGGGAAAGCAACTTGAAGATGGGCGCACACTTTCTGACTATAAC 1730455 Query 22399 ATTCAAAAAGAATCCACCATACATTTAGTT 22428 ||||| || ||||| || | ||| | ||| Sbjct 1730456 ATTCAGAAGGAATCGACGCTTCATCTTGTT 1730485 Score = 82.4 bits (90), Expect = 6e-11 Identities = 102/140 (73%), Gaps = 0/140 (0%) Strand=Plus/Plus Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278 |||||||||||||| |||||| | || ||||||||| | || | ||||| ||| | | Sbjct 1707255 ATGCAAATTTTTGTCAAAACTCTTACTGGTAAAACGATAACATTGGAAGTCGAAGCGTCA 1707314 Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338 ||||| | || || | || || ||||| || || || ||||| || || ||||| Sbjct 1707315 GATACGATTGAAAATGTTAAGGCCAAGATTCAGGATAAAGAAGGTATCCCGCCGGATCAG 1707374 Query 22339 CAACGTCTTATATTTGCCGG 22358 || |||||||| || || || Sbjct 1707375 CAGCGTCTTATTTTCGCAGG 1707394 Score = 82.4 bits (90), Expect = 6e-11 Identities = 144/210 (69%), Gaps = 0/210 (0%) Strand=Plus/Plus Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278 ||||||||||| || ||||| | || || || || | || | | ||| ||| || | Sbjct 1733571 ATGCAAATTTTCGTAAAAACGCTGACGGGCAAGACAATTACGTTAGCAGTCGAAGCCTCT 1733630 Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338 || || | || | | ||| || || || |||||||| || || ||||||||||| Sbjct 1733631 GACACAATAGAGAGTGTAAAAGCCAAGATCCAGGACAAGGAAGGCATCCCACCCGATCAG 1733690 Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398 || ||||| || ||||| || || || | || ||| ||||| | || || || || Sbjct 1733691 CAGCGTCTGATCTTTGCGGGAAAGCAACTTGAAGATGGGCGCACACTTTCTGACTATAAT 1733750 Query 22399 ATTCAAAAAGAATCCACCATACATTTAGTT 22428 ||||| || ||||| || | ||| | ||| Sbjct 1733751 ATTCAGAAGGAATCGACGCTTCATCTTGTT 1733780 >seq5 Length=2717535 Score = 98.7 bits (108), Expect = 8e-16 Identities = 83/102 (81%), Gaps = 0/102 (0%) Strand=Plus/Plus Query 51059 TCTCAATCATGCCGTTTTACTTGTGGGCTACGGTGTCGAAAACAATATACCATATTGGAC 51118 ||||||||||| ||| | ||||||| |||||||| ||| ||||| ||||||||||| Sbjct 2073486 TCTCAATCATGGTGTTCTTATTGTGGGATACGGTGTGGAATTCAATAAACCATATTGGAT 2073545 Query 51119 AATTAAAAATACTTGGGGCGAGGATTGGGGCGAAAATGGATA 51160 || ||||| | ||||||||| | |||||||||||||| || Sbjct 2073546 TATCAAAAACAGTTGGGGCGAAAAATGGGGCGAAAATGGTTA 2073587 >seq161 Length=136094 Score = 86.0 bits (94), Expect = 5e-12 Identities = 103/140 (74%), Gaps = 0/140 (0%) Strand=Plus/Plus Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278 ||||| ||||| || ||||| || || ||||| || | || |||||||| ||| | | Sbjct 37917 ATGCAGATTTTCGTGAAAACATTGACTGGTAAGACAATAACACTTGAAGTTGAAGCATCG 37976 Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338 ||||| | || || |||| ||| ||||| |||||||| || ||||||||||| || Sbjct 37977 GATACTATTGAGAATGTCAAGGCAAAGATTCAGGACAAGGAAGGAATTCCACCCGACCAG 38036 Query 22339 CAACGTCTTATATTTGCCGG 22358 || ||| | || || || || Sbjct 38037 CAGCGTTTGATTTTCGCTGG 38056 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 419721094162750