Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dracunculus_20medinensis_20[genbank_20GCA_5F000946415.1_202014-11- 13] 1,350 sequences; 103,750,844 total letters Query= NC_008724.1 Length=288047 Score E Sequences producing significant alignments: (Bits) Value seq8 143 5e-29 seq161 102 2e-16 seq106 86.0 1e-11 >seq8 Length=2239894 Score = 143 bits (158), Expect = 5e-29 Identities = 175/236 (74%), Gaps = 2/236 (1%) Strand=Plus/Minus Query 68228 TTAATTTCCTCCGCGAAGGCGCAATACCAAG-TGTAGCGTGGACTCTTTTTGGATGTTAT 68286 |||||| || || ||||| || || | |||| || ||||| || || || || ||||||| Sbjct 1730509 TTAATTGCCACCACGAAGACG-AAGAACAAGATGAAGCGTCGATTCCTTCTGAATGTTAT 1730451 Query 68287 AATCGGAGAGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGT 68346 | || || ||||| | ||||||||| | ||||| || || || || || | || || | Sbjct 1730450 AGTCAGAAAGTGTGCGCCCATCTTCAAGTTGCTTTCCCGCAAAGATCAGACGCTGCTGAT 1730391 Query 68347 CGGGTGGAATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTG 68406 ||||||| |||||||||||||| || ||||| || || || ||| || ||||| | | Sbjct 1730390 CGGGTGGGATGCCTTCCTTGTCCTGGATCTTGGCTTTTACACTCTCTATTGTGTCAGAGG 1730331 Query 68407 ATTCTACTTCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCATT 68462 ||| ||| | || || || || || ||||| || || || ||||| || |||||| Sbjct 1730330 CTTCGACTGCTAACGTAATTGTCTTGCCCGTCAGCGTTTTTACGAAAATTTGCATT 1730275 Score = 140 bits (154), Expect = 6e-28 Identities = 174/236 (74%), Gaps = 2/236 (1%) Strand=Plus/Minus Query 68228 TTAATTTCCTCCGCGAAGGCGCAATACCAAG-TGTAGCGTGGACTCTTTTTGGATGTTAT 68286 |||||| || || ||||| || || | |||| || ||||| || || || || || |||| Sbjct 1733804 TTAATTGCCACCACGAAGACG-AAGAACAAGATGAAGCGTCGATTCCTTCTGAATATTAT 1733746 Query 68287 AATCGGAGAGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGT 68346 | || || ||||| | ||||||||| | ||||| || || || || || | || || | Sbjct 1733745 AGTCAGAAAGTGTGCGCCCATCTTCAAGTTGCTTTCCCGCAAAGATCAGACGCTGCTGAT 1733686 Query 68347 CGGGTGGAATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTG 68406 ||||||| |||||||||||||| || ||||| || || || ||| || ||||| | | Sbjct 1733685 CGGGTGGGATGCCTTCCTTGTCCTGGATCTTGGCTTTTACACTCTCTATTGTGTCAGAGG 1733626 Query 68407 ATTCTACTTCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCATT 68462 ||| ||| | || || || || || ||||| || || || ||||| || |||||| Sbjct 1733625 CTTCGACTGCTAACGTAATTGTCTTGCCCGTCAGCGTTTTTACGAAAATTTGCATT 1733570 >seq161 Length=136094 Score = 102 bits (112), Expect = 2e-16 Identities = 107/141 (76%), Gaps = 0/141 (0%) Strand=Plus/Minus Query 68322 CCGGCGAATATGAGTCTTTGTTGGTCGGGTGGAATGCCTTCCTTGTCTTGAATCTTTGCC 68381 || ||||| || | | || |||||||||||||| ||||||||||| |||||||||||| Sbjct 38056 CCAGCGAAAATCAAACGCTGCTGGTCGGGTGGAATTCCTTCCTTGTCCTGAATCTTTGCC 37997 Query 68382 TTGACGGCCTCGATGGTGTCTGCTGATTCTACTTCCAAGGTGATGGTTTTTCCCGTGAGG 68441 ||||| ||| || || || | || ||| ||||| | || || || || || || | Sbjct 37996 TTGACATTCTCAATAGTATCCGATGCTTCAACTTCAAGTGTTATTGTCTTACCAGTCAAT 37937 Query 68442 GTCTTGACGAATATCTGCATT 68462 || || ||||| ||||||||| Sbjct 37936 GTTTTCACGAAAATCTGCATT 37916 >seq106 Length=210941 Score = 86.0 bits (94), Expect = 1e-11 Identities = 62/72 (86%), Gaps = 0/72 (0%) Strand=Plus/Minus Query 84456 GCCCGGTTAGCTCAGTCGGCAGAGCGCAAGGCTCTTAACCTTGTGGTCGTGGGTTCGAGC 84515 ||||||||||||||||||| ||||| | || ||||||| || | |||| |||||||||| Sbjct 204723 GCCCGGTTAGCTCAGTCGGTAGAGCACCAGACTCTTAATCTGGCTGTCGCGGGTTCGAGC 204664 Query 84516 CCCACATCGGGC 84527 ||| |||||||| Sbjct 204663 CCCGCATCGGGC 204652 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 921606847622000