Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dracunculus_20medinensis_20[genbank_20GCA_5F000946415.1_202014-11- 13] 1,350 sequences; 103,750,844 total letters Query= NC_009898.1 Length=368683 Score E Sequences producing significant alignments: (Bits) Value seq8 158 3e-33 seq37 104 6e-17 >seq8 Length=2239894 Score = 158 bits (174), Expect = 3e-33 Identities = 171/227 (75%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306 ||||| || || | || || ||||||| || ||| || || || |||||||| | Sbjct 1707838 CCACCACGAAGACGCAGAACAAGATGAAGAGTCGATTCCTTCTGAATGTTATAGTCAGAA 1707779 Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG 288366 |||||||| || ||||| | |||||||| || |||||||||||||| ||| |||| Sbjct 1707778 AGCGTGCGCCCATCTTCAAGCTGTTTTCCCGCAAAGATCAGACGCTGCTGATCGGGTGGG 1707719 Query 288367 ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCTACT 288426 || |||||||| |||||||| || ||||| |||||||| || | ||| | ||| ||| Sbjct 1707718 ATGCCTTCTTTGTCCTGGATCTTGGCTTTAACGTTTTCAATCGTATCTGATGCTTCGACT 1707659 Query 288427 TCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 || | || ||||||||||| || | ||||| |||||||| ||||| Sbjct 1707658 TCTAAAGTTATCGTCTTCCCAGTTAACGTCTTCACGAATATTTGCAT 1707612 Score = 141 bits (156), Expect = 2e-28 Identities = 168/228 (74%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306 ||||| || || | ||| || ||||||| ||| ||| || || ||||||||||| | Sbjct 1733797 CCACCACGAAGACGAAGAACAAGATGAAGCGTCGATTCCTTCTGAATATTATAGTCAGAA 1733738 Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG 288366 || ||||| || ||||| | ||| ||||| || |||||||||||||| ||| |||| Sbjct 1733737 AGTGTGCGCCCATCTTCAAGTTGCTTTCCCGCAAAGATCAGACGCTGCTGATCGGGTGGG 1733678 Query 288367 ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCTACT 288426 || ||||| || |||||||| || ||||| || | ||||| | || | ||| ||| Sbjct 1733677 ATGCCTTCCTTGTCCTGGATCTTGGCTTTTACACTCTCTATTGTGTCAGAGGCTTCGACT 1733618 Query 288427 TCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCATT 288474 | | ||| || ||||| || ||||| || || ||||| || |||||| Sbjct 1733617 GCTAACGTAATTGTCTTGCCCGTCAGCGTTTTTACGAAAATTTGCATT 1733570 Score = 136 bits (150), Expect = 9e-27 Identities = 167/228 (73%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306 ||||| || || | ||| || ||||||| ||| ||| || || || |||||||| | Sbjct 1730502 CCACCACGAAGACGAAGAACAAGATGAAGCGTCGATTCCTTCTGAATGTTATAGTCAGAA 1730443 Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG 288366 || ||||| || ||||| | ||| ||||| || |||||||||||||| ||| |||| Sbjct 1730442 AGTGTGCGCCCATCTTCAAGTTGCTTTCCCGCAAAGATCAGACGCTGCTGATCGGGTGGG 1730383 Query 288367 ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCTACT 288426 || ||||| || |||||||| || ||||| || | ||||| | || | ||| ||| Sbjct 1730382 ATGCCTTCCTTGTCCTGGATCTTGGCTTTTACACTCTCTATTGTGTCAGAGGCTTCGACT 1730323 Query 288427 TCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCATT 288474 | | ||| || ||||| || ||||| || || ||||| || |||||| Sbjct 1730322 GCTAACGTAATTGTCTTGCCCGTCAGCGTTTTTACGAAAATTTGCATT 1730275 Score = 93.3 bits (102), Expect = 1e-13 Identities = 105/141 (74%), Gaps = 0/141 (0%) Strand=Plus/Minus Query 288334 CCTGCGAAGATCAGACGCTGTTGAGAATCTGGGATTCCTTCTTTATCCTGGATTTTCGCT 288393 |||||||| || |||||||| ||| ||||| |||||||||||||| || || || Sbjct 1707394 CCTGCGAAAATAAGACGCTGCTGATCCGGCGGGATACCTTCTTTATCCTGAATCTTGGCC 1707335 Query 288394 TTCACGTTTTCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGA 288453 || || ||||| || | ||| || ||| ||||| | || ||||| || || || ||| Sbjct 1707334 TTAACATTTTCAATCGTATCTGACGCTTCGACTTCCAATGTTATCGTTTTACCAGTAAGA 1707275 Query 288454 GTCTTGACGAATATCTGCATT 288474 || ||||| || || |||||| Sbjct 1707274 GTTTTGACAAAAATTTGCATT 1707254 Score = 84.2 bits (92), Expect = 5e-11 Identities = 107/146 (73%), Gaps = 6/146 (4%) Strand=Plus/Minus Query 288331 TTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGGATTCCTTCTTTATCCTGGATTTTC 288390 || || || || |||| ||||| ||| | ||| |||||||||||||| || ||||| Sbjct 1706278 TTACCCGCAAAAATCAATCGCTGCTGATCAGGTGGAATTCCTTCTTTATCTTGAATTTTT 1706219 Query 288391 GCTTTCACGTTTTCTATAGAATCGCTCGAT---TCTACTTCGAGCGTGATCGTCTTCCCG 288447 |||||||| ||||| || | ||| |||| || ||||| | ||| ||||| || || Sbjct 1706218 GCTTTCACATTTTCGATTGTATC---CGATGCCTCAACTTCTAACGTTATCGTTTTACCA 1706162 Query 288448 GTCAGAGTCTTGACGAATATCTGCAT 288473 || | || || || || |||||||| Sbjct 1706161 GTTAACGTTTTCACAAAGATCTGCAT 1706136 >seq37 Length=594896 Score = 104 bits (114), Expect = 6e-17 Identities = 114/151 (75%), Gaps = 3/151 (2%) Strand=Plus/Minus Query 269243 CGAAGAATCCCTTCGCCTTTATGGAACTAATTTCGCTCGAAGGAAAGACGAACTTCTTCG 269302 |||||||||| |||| |||||||| | || || |||||| ||| ||||| ||||||| Sbjct 366413 CGAAGAATCCATTCGATTTTATGGATCGCATATCAATCGAAGCAAAAACGAATTTCTTCG 366354 Query 269303 AAAAGCGTGTCAGCGACTATCAACGTCCTGGTGTAATG---AATCCAGAAGACAATATTT 269359 |||||||||| | |||||||| |||| || ||| |||||| | || ||||||| Sbjct 366353 AAAAGCGTGTGAATGACTATCAGAAAGCTGGAGTGATGGCAAATCCAAATGAGAATATTT 366294 Query 269360 TTGCCATCGATGATGATTTTTAAGACTTTTA 269390 | || || | ||||||||||| | |||| Sbjct 366293 TCAGTATTGAGGCTGATTTTTAAGGCCTTTA 366263 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1179633995665300